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ENSG00000269980 Gene(RNA Gene)

 

GCID:
GC12P123263
GIFtS:
7
Genes Participants
UDN Logo

Aliases for ENSG00000269980 Gene

Subcategory (RNA class) for ENSG00000269980 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for ENSG00000269980 Gene

  • Novel Transcript, Antisense To CDK2AP1 5
  • AC068768.1 5

External Ids for ENSG00000269980 Gene

ORGUL Members for ENSG00000269980 Gene

Previous GeneCards Identifiers for ENSG00000269980 Gene

  • GC12P123746

Summaries for ENSG00000269980 Gene

GeneCards Summary for ENSG00000269980 Gene

ENSG00000269980 is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for ENSG00000269980 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000269980 Gene

Genomics for ENSG00000269980 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269980 Gene

Promoters and enhancers for ENSG00000269980 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J123260 Enhancer 0.4 Ensembl 600.7 -2.0 -1959 0.2 PRDM1 ZNF366 ENSG00000269980 CDK2AP1 MPHOSPH9
GH12J123807 Enhancer 0.6 Ensembl 4.9 +545.7 545741 0.8 ZNF121 PRDM1 IKZF1 ZIC2 CTCF RBAK SCRT2 WT1 ZNF398 ZNF169 EIF2B1 DDX55 ATP6V0A2 GTF2H3 ENSG00000270130 NCOR2 ENSG00000269938 DNAH10OS C12orf65 ENSG00000269997
GH12J123265 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 +7.3 7339 7.2 ZNF652 ZFX ZNF148 NKRF RERE TFE3 ZBTB7A YY1 SP7 PPARG CDK2AP1 DDX55 C12orf65 EIF2B1 MPHOSPH9 TMED2-DT TCTN2 RSRC2 ZCCHC8 SBNO1-AS1
GH12J123250 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -10.8 -10773 2.6 NFIB MAFK YY1 SP7 KLF14 PRDM1 SMARCA4 CREB1 GLIS2 PKNOX1 CDK2AP1 SBNO1-AS1 PITPNM2 MPHOSPH9 ENSG00000269980 C12orf65
GH12J123264 Enhancer 0.5 ENCODE 0.7 +2.7 2729 0.2 CTCF ZNF600 RAD21 ARID4B C12orf65 RILPL1 ENSG00000269980 CDK2AP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269980 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269980 Gene

Genomic Locations for ENSG00000269980 Gene
chr12:123,262,060-123,262,402
(GRCh38/hg38)
Size:
343 bases
Orientation:
Plus strand
chr12:123,746,607-123,746,949
(GRCh37/hg19)
Size:
343 bases
Orientation:
Plus strand

Genomic View for ENSG00000269980 Gene

Genes around ENSG00000269980 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269980 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269980 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000269980 Gene

Proteins for ENSG00000269980 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000269980 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269980 Gene

Domains & Families for ENSG00000269980 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000269980 Gene

Function for ENSG00000269980 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000269980 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269980 Gene

Localization for ENSG00000269980 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269980 Gene

Pathways & Interactions for ENSG00000269980 Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
PathCards logo

SuperPathways for ENSG00000269980 Gene

No Data Available

Interacting Proteins for ENSG00000269980 Gene

Gene Ontology (GO) - Biological Process for ENSG00000269980 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269980 Gene

Drugs & Compounds for ENSG00000269980 Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for ENSG00000269980 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000269980 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269980 Gene

No ASD Table

Relevant External Links for ENSG00000269980 Gene

GeneLoc Exon Structure for
ENSG00000269980

Expression for ENSG00000269980 Gene

Products:

  1. Primer
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269980 Gene

mRNA expression in normal human tissues for ENSG00000269980 Gene
mRNA expression by GTEx for ENSG00000269980 Gene
genes like me logo Genes that share expression patterns with ENSG00000269980: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269980 Gene

Orthologs for ENSG00000269980 Gene

Evolution for ENSG00000269980 Gene

ENSEMBL:
Gene Tree for ENSG00000269980 (if available)
TreeFam:
Gene Tree for ENSG00000269980 (if available)

No data available for Orthologs for ENSG00000269980 Gene

Paralogs for ENSG00000269980 Gene

No data available for Paralogs for ENSG00000269980 Gene

Variants for ENSG00000269980 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269980 Gene

Disorders for ENSG00000269980 Gene

No disorders were found for ENSG00000269980 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269980 Gene

Publications for ENSG00000269980 Gene

No publications were found for ENSG00000269980 Gene.

No data available for External Links for ENSG00000269980 Gene

Products for ENSG00000269980 Gene

Sources for ENSG00000269980 Gene

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