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Aliases for ENSG00000269949 Gene

Subcategory (RNA class) for ENSG00000269949 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000269949 Gene

  • Novel Transcript 5
  • AC069307.1 5

External Ids for ENSG00000269949 Gene

ORGUL Members for ENSG00000269949 Gene

Previous GeneCards Identifiers for ENSG00000269949 Gene

  • GC04M057827

Summaries for ENSG00000269949 Gene

GeneCards Summary for ENSG00000269949 Gene

ENSG00000269949 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269949 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000269949 Gene

Genomics for ENSG00000269949 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269949 Gene

Promoters and enhancers for ENSG00000269949 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J056975 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 21.4 -17.7 -17670 8.5 SP1 ZFX ELF3 MNT NKRF POLR2A MLLT1 ZNF121 CEBPG GTF2F1 NOA1 POLR2B ENSG00000269949 RNU6-998P REST
GH04J056906 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.7 +52.4 52436 4.7 SP1 ZFX ZNF148 NKRF MLLT1 ZNF121 GTF2F1 ZNF687 AHR CDC5L REST NOA1 ENSG00000269949 POLR2B SPINK2 ENSG00000251799 RNU6-998P GC04P056945
GH04J057019 Enhancer 0.8 Ensembl ENCODE dbSUPER 21.9 -59.6 -59567 2 FOS CEBPG JUN ENSG00000269949 NOA1 RNU6-998P POLR2B UBE2CP3
GH04J056936 Enhancer 0.7 Ensembl ENCODE 25.5 +23.9 23888 1.3 CEBPB JUN JUND FOS FOSL1 ENSG00000269949 POLR2B NOA1 REST GC04P056945
GH04J057037 Enhancer 0.8 Ensembl dbSUPER 16.9 -77.1 -77101 1.1 CTCF RAD21 ARID2 REST ZNF524 DEK SMC3 ZNF654 BHLHE40 ZNF143 ENSG00000269949 RNU6-998P NOA1 POLR2B UBE2CP3 IGFBP7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269949 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269949 Gene

Genomic Locations for ENSG00000269949 Gene
chr4:56,960,927-56,961,373
(GRCh38/hg38)
Size:
447 bases
Orientation:
Minus strand
chr4:57,827,093-57,827,539
(GRCh37/hg19)
Size:
447 bases
Orientation:
Minus strand

Genomic View for ENSG00000269949 Gene

Genes around ENSG00000269949 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269949 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269949 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269949 Gene

Proteins for ENSG00000269949 Gene

Post-translational modifications for ENSG00000269949 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269949 Gene

Domains & Families for ENSG00000269949 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000269949 Gene

Function for ENSG00000269949 Gene

Phenotypes From GWAS Catalog for ENSG00000269949 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269949 Gene

Localization for ENSG00000269949 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269949 Gene

Pathways & Interactions for ENSG00000269949 Gene

PathCards logo

SuperPathways for ENSG00000269949 Gene

No Data Available

Interacting Proteins for ENSG00000269949 Gene

Gene Ontology (GO) - Biological Process for ENSG00000269949 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269949 Gene

Drugs & Compounds for ENSG00000269949 Gene

No Compound Related Data Available

Transcripts for ENSG00000269949 Gene

mRNA/cDNA for ENSG00000269949 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269949 Gene

No ASD Table

Relevant External Links for ENSG00000269949 Gene

GeneLoc Exon Structure for
ENSG00000269949

Expression for ENSG00000269949 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269949 Gene

genes like me logo Genes that share expression patterns with ENSG00000269949: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269949 Gene

Orthologs for ENSG00000269949 Gene

Evolution for ENSG00000269949 Gene

ENSEMBL:
Gene Tree for ENSG00000269949 (if available)
TreeFam:
Gene Tree for ENSG00000269949 (if available)

No data available for Orthologs for ENSG00000269949 Gene

Paralogs for ENSG00000269949 Gene

No data available for Paralogs for ENSG00000269949 Gene

Variants for ENSG00000269949 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269949 Gene

Disorders for ENSG00000269949 Gene

No disorders were found for ENSG00000269949 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269949 Gene

Publications for ENSG00000269949 Gene

No publications were found for ENSG00000269949 Gene.

No data available for External Links for ENSG00000269949 Gene

Products for ENSG00000269949 Gene

Sources for ENSG00000269949 Gene

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