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Aliases for ENSG00000269919 Gene

Subcategory (RNA class) for ENSG00000269919 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000269919 Gene

  • Novel Transcript, Sense Intronic To PRDM1 5
  • AL022067.1 5

External Ids for ENSG00000269919 Gene

ORGUL Members for ENSG00000269919 Gene

Previous GeneCards Identifiers for ENSG00000269919 Gene

  • GC06P106548

Summaries for ENSG00000269919 Gene

GeneCards Summary for ENSG00000269919 Gene

ENSG00000269919 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269919 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000269919 Gene

Genomics for ENSG00000269919 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269919 Gene

Promoters and enhancers for ENSG00000269919 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J106096 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.3 300 7.5 SP1 ZNF148 NKRF GTF2F1 BACH1 MAFK JUND SP7 RELA CREM PRDM1 ENSG00000269919 PIR35075 ATG5
GH06J106082 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.3 -13348 8.8 ZNF652 CC2D1A CBFA2T2 NKRF MLLT1 POLR2A ZNF687 ZSCAN21 BACH1 MAFK PRDM1 RNU6-344P ATG5 ENSG00000269919 GC06M106046
GH06J106093 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.9 -5942 1.7 PRDM1 ATG5 RNU6-344P ENSG00000269919 GC06M106046
GH06J106134 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +35.2 35200 2.4 GTF2F1 NCOA3 BACH1 MAFK TRIM24 ZNF639 SMARCA4 MTA1 FOSL2 CREB1 PRDM1 ENSG00000269919 PIR35075 ATG5
GH06J106044 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.3 -49.3 -49283 13.2 SP1 CBFA2T2 ZNF148 PRDM1 CEBPA ATF1 HDAC1 EP300 SOX6 CTBP1 PRDM1 ATG5 GC06M106046 ENSG00000269919
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269919 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269919 Gene

Genomic Locations for ENSG00000269919 Gene
chr6:106,100,140-106,100,593
(GRCh38/hg38)
Size:
454 bases
Orientation:
Plus strand
chr6:106,548,015-106,548,468
(GRCh37/hg19)
Size:
454 bases
Orientation:
Plus strand

Genomic View for ENSG00000269919 Gene

Genes around ENSG00000269919 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269919 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269919 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269919 Gene

Proteins for ENSG00000269919 Gene

Post-translational modifications for ENSG00000269919 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269919 Gene

Domains & Families for ENSG00000269919 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000269919 Gene

Function for ENSG00000269919 Gene

Phenotypes From GWAS Catalog for ENSG00000269919 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269919 Gene

Localization for ENSG00000269919 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269919 Gene

Pathways & Interactions for ENSG00000269919 Gene

PathCards logo

SuperPathways for ENSG00000269919 Gene

No Data Available

Interacting Proteins for ENSG00000269919 Gene

Gene Ontology (GO) - Biological Process for ENSG00000269919 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269919 Gene

Drugs & Compounds for ENSG00000269919 Gene

No Compound Related Data Available

Transcripts for ENSG00000269919 Gene

mRNA/cDNA for ENSG00000269919 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269919 Gene

No ASD Table

Relevant External Links for ENSG00000269919 Gene

GeneLoc Exon Structure for
ENSG00000269919

Expression for ENSG00000269919 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269919 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269919 Gene

This gene is overexpressed in Whole Blood (x6.1), Minor Salivary Gland (x4.4), Esophagus - Mucosa (x4.4), and Vagina (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000269919: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269919 Gene

Orthologs for ENSG00000269919 Gene

Evolution for ENSG00000269919 Gene

ENSEMBL:
Gene Tree for ENSG00000269919 (if available)
TreeFam:
Gene Tree for ENSG00000269919 (if available)

No data available for Orthologs for ENSG00000269919 Gene

Paralogs for ENSG00000269919 Gene

No data available for Paralogs for ENSG00000269919 Gene

Variants for ENSG00000269919 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269919 Gene

Disorders for ENSG00000269919 Gene

No disorders were found for ENSG00000269919 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269919 Gene

Publications for ENSG00000269919 Gene

No publications were found for ENSG00000269919 Gene.

No data available for External Links for ENSG00000269919 Gene

Products for ENSG00000269919 Gene

Sources for ENSG00000269919 Gene

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