Aliases for ENSG00000269843 Gene

Subcategory (RNA class) for ENSG00000269843 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000269843 Gene

  • Novel Transcript 5
  • NONHSAG025851 92
  • HSALNG0126149 167
  • Lnc-CYP2A6-1 168
  • AC008537.2 5

External Ids for ENSG00000269843 Gene

Previous GeneCards Identifiers for ENSG00000269843 Gene

  • GC19M041337

Summaries for ENSG00000269843 Gene

GeneCards Summary for ENSG00000269843 Gene

ENSG00000269843 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269843 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269843 Gene

Genomics for ENSG00000269843 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269843 Gene

Promoters and enhancers for ENSG00000269843 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J040835 Enhancer 0.4 Ensembl dbSUPER 500.7 +1.6 1609 0.4 ZSCAN26 ENSG00000269843 ZNF780B NUMBL ITPKC CYP2B7P CYP2F2P lnc-EGLN2-2 ENSG00000268797
GH19J040836 Enhancer 0.4 Ensembl 500.7 +0.3 309 0.2 ZFHX2 CEBPG CEBPB EGR2 ENSG00000269843 CYP2B7P CYP2F2P ENSG00000268797
GH19J041294 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 55.8 -466.1 -466091 17 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF ZSCAN5C SIN3A NRF1 TCF12 CCDC97 HNRNPUL1 ZNF526 SNRPA ZNF574 ENSG00000269843 COQ8B TGFB1 ITPKC TMEM91
GH19J040462 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 54.3 +371.7 371733 5 HNRNPK ZNF217 CTCF ZSCAN5C SIN3A NRF1 TCF12 POLR2G SP1 RBAK BLVRB SPTBN4 ENSG00000269843 ZNF780B SNRPA HNRNPUL1 SERTAD3 CYP2G1P FBL AKT2
GH19J040796 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 49.7 +34.9 34873 11.8 FOXK2 EP300 CTCF SIN3A NRF1 MYC TCF12 POLR2G USF1 SP1 EGLN2 ENSG00000268797 piR-56759-279 ZNF780B HNRNPUL1 SNRPA ENSG00000269843 CCDC97 FBL ITPKC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269843 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269843 Gene

Genomic Locations for ENSG00000269843 Gene
chr19:40,831,221-40,837,210
(GRCh38/hg38)
Size:
5,990 bases
Orientation:
Minus strand
chr19:41,337,126-41,343,115
(GRCh37/hg19)
Size:
5,990 bases
Orientation:
Minus strand

Genomic View for ENSG00000269843 Gene

Genes around ENSG00000269843 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269843 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269843 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269843 Gene

Proteins for ENSG00000269843 Gene

Post-translational modifications for ENSG00000269843 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269843 Gene

Domains & Families for ENSG00000269843 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269843 Gene

Function for ENSG00000269843 Gene

Phenotypes From GWAS Catalog for ENSG00000269843 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269843 Gene

Localization for ENSG00000269843 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269843 Gene

Pathways & Interactions for ENSG00000269843 Gene

PathCards logo

SuperPathways for ENSG00000269843 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000269843 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269843 Gene

Drugs & Compounds for ENSG00000269843 Gene

No Compound Related Data Available

Transcripts for ENSG00000269843 Gene

mRNA/cDNA for ENSG00000269843 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269843 Gene

No ASD Table

Relevant External Links for ENSG00000269843 Gene

GeneLoc Exon Structure for
ENSG00000269843

Expression for ENSG00000269843 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269843 Gene

genes like me logo Genes that share expression patterns with ENSG00000269843: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269843 Gene

Orthologs for ENSG00000269843 Gene

Evolution for ENSG00000269843 Gene

ENSEMBL:
Gene Tree for ENSG00000269843 (if available)
TreeFam:
Gene Tree for ENSG00000269843 (if available)

No data available for Orthologs for ENSG00000269843 Gene

Paralogs for ENSG00000269843 Gene

No data available for Paralogs for ENSG00000269843 Gene

Variants for ENSG00000269843 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269843 Gene

Disorders for ENSG00000269843 Gene

No disorders were found for ENSG00000269843 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269843 Gene

Publications for ENSG00000269843 Gene

No publications were found for ENSG00000269843 Gene.

No data available for Mastermind for ENSG00000269843 Gene

Products for ENSG00000269843 Gene

Sources for ENSG00000269843 Gene