Aliases for ENSG00000269707 Gene

Subcategory (RNA class) for ENSG00000269707 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000269707 Gene

  • Novel Transcript, Sense Overlapping POU3F3 5
  • NONHSAG028807 92
  • HSALNG0017543 167
  • NONHSAG028808 92
  • Lnc-POU3F3-7 168
  • AC018730.1 5

External Ids for ENSG00000269707 Gene

Previous GeneCards Identifiers for ENSG00000269707 Gene

  • GC02P105469

Summaries for ENSG00000269707 Gene

GeneCards Summary for ENSG00000269707 Gene

ENSG00000269707 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269707 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269707 Gene

Genomics for ENSG00000269707 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269707 Gene

Promoters and enhancers for ENSG00000269707 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J104848 Promoter/Enhancer 2.3 VISTA FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.7 -720 8.1 EP300 CTCF ZNF10 ZIC2 ZBTB10 ZBTB26 SAP30 RFX1 KLF7 RAD21 POU3F3 ENSG00000269707 PANTR1 GPR45 piR-57133-347
GH02J105575 Enhancer 0.9 Ensembl ENCODE 4.9 +723.3 723322 2.4 CTCF REST RAD21 CTBP1 SMC3 RBM25 ESRRA ARNT SPI1 NR2F2 ENSG00000235522 ENSG00000238273 ENSG00000269707 FHL2 piR-59169 HSALNG0017587
GH02J104871 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +19.4 19416 2.2 CTCF PHF8 ZFX ZIC2 ZBTB10 ZBTB26 SAP30 RAD21 ATF2 SMC3 LINC01159 POU3F3 MRPS9 GPR45 ENSG00000269707 lnc-POU3F3-4
GH02J104854 Promoter/Enhancer 0.9 Ensembl dbSUPER 0.7 +4.1 4115 1.2 EZH2 TCF12 SPI1 CBX8 SUZ12 RNF2 HDAC2 EGR1 CTBP2 RBBP5 lnc-POU3F3-4 MRPS9 ENSG00000269707 POU3F3
GH02J104845 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -8.1 -8062 0.6 EP300 ZNF10 ZBTB10 GABPA ZBTB26 ZNF341 POLR2A EZH2 KLF9 ZNF316 POU3F3 MRPS9 PANTR1 GPR45 ENSG00000269707 piR-57133-347
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269707 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269707 Gene

Genomic Locations for ENSG00000269707 Gene
chr2:104,853,285-104,927,722
(GRCh38/hg38)
Size:
74,438 bases
Orientation:
Plus strand
chr2:105,469,743-105,542,510
(GRCh37/hg19)
Size:
72,768 bases
Orientation:
Plus strand

Genomic View for ENSG00000269707 Gene

Genes around ENSG00000269707 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269707 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269707 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269707 Gene

Proteins for ENSG00000269707 Gene

Post-translational modifications for ENSG00000269707 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269707 Gene

Domains & Families for ENSG00000269707 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269707 Gene

Function for ENSG00000269707 Gene

Phenotypes From GWAS Catalog for ENSG00000269707 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269707 Gene

Localization for ENSG00000269707 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269707 Gene

Pathways & Interactions for ENSG00000269707 Gene

PathCards logo

SuperPathways for ENSG00000269707 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000269707 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269707 Gene

Drugs & Compounds for ENSG00000269707 Gene

No Compound Related Data Available

Transcripts for ENSG00000269707 Gene

mRNA/cDNA for ENSG00000269707 Gene

16 RNACentral transcripts :
6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
2 LncBook transcripts :
11 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269707 Gene

No ASD Table

Relevant External Links for ENSG00000269707 Gene

GeneLoc Exon Structure for
ENSG00000269707

Expression for ENSG00000269707 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269707 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269707 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x4.3) and Brain - Hippocampus (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000269707: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269707 Gene

Orthologs for ENSG00000269707 Gene

Evolution for ENSG00000269707 Gene

ENSEMBL:
Gene Tree for ENSG00000269707 (if available)
TreeFam:
Gene Tree for ENSG00000269707 (if available)

No data available for Orthologs for ENSG00000269707 Gene

Paralogs for ENSG00000269707 Gene

No data available for Paralogs for ENSG00000269707 Gene

Variants for ENSG00000269707 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269707 Gene

Disorders for ENSG00000269707 Gene

No disorders were found for ENSG00000269707 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269707 Gene

Publications for ENSG00000269707 Gene

No publications were found for ENSG00000269707 Gene.

No data available for Mastermind for ENSG00000269707 Gene

Products for ENSG00000269707 Gene

Sources for ENSG00000269707 Gene