Aliases for ENSG00000269688 Gene

Subcategory (RNA class) for ENSG00000269688 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000269688 Gene

  • Novel Transcript, Sense Intronic To HNRNPL 5
  • HSALNG0125952 167
  • NONHSAG025761 92
  • AC008982.2 5
  • Lnc-ECH1-5 168

External Ids for ENSG00000269688 Gene

Additional External Ids for ENSG00000269688 Gene

Previous GeneCards Identifiers for ENSG00000269688 Gene

  • GC19M039336
  • GC19M038845
  • GC19M039021
  • GC19M039160
  • GC19M039714
  • GC19M038847
  • GC19M039011
  • GC19M038961

Summaries for ENSG00000269688 Gene

GeneCards Summary for ENSG00000269688 Gene

ENSG00000269688 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269688 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269688 Gene

Genomics for ENSG00000269688 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269688 Gene

Promoters and enhancers for ENSG00000269688 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J038844 Enhancer 0.7 ENCODE dbSUPER 500.7 +0.1 106 0.9 POLR2G RBM22 POLR2A ZNF664 PAF1 POLR2B MNT ENSG00000269688 lnc-ECH1-6 RINL HNRNPL ENSG00000268083 lnc-ECH1-2
GH19J038847 Enhancer 0.5 ENCODE dbSUPER 500.7 -0.8 -797 0.2 POLR2A POLR2B ENSG00000269688 lnc-ECH1-6 LGALS4 HNRNPL lnc-NFKBIB-5
GH19J038647 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 43.4 +185.7 185707 25.6 EP300 ZNF217 ZSCAN5C SIN3A TCF12 NRF1 MYC POLR2G SP1 NCOR1 ACTN4 HNRNPL ZFP30 ZNF781 ZNF607 ENSG00000267152 ZNF573 RN7SL566P SUPT5H ENSG00000269688
GH19J039397 Promoter/Enhancer 3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 32.7 -561.6 -561576 20 RXRA EP300 FOXK2 HNRNPK ZBTB40 ZNF217 CTCF ZSCAN5C SIN3A NRF1 ZFP36 PAF1 5EW4_A-031 MG828566 HNRNPL ZNF780B FBL SUPT5H RPS16 EID2B
GH19J038336 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 32.7 +509.0 509000 2.6 ZBTB40 ZNF217 CTCF SIN3A NRF1 TCF12 USF1 SP1 BCLAF1 RBAK CATSPERG HNRNPL ZNF527 ZFP30 ZNF571 ZNF573 C19orf33 ZNF607 ZNF540 ZNF793
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269688 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269688 Gene

Genomic Locations for ENSG00000269688 Gene
chr19:38,844,729-38,845,499
(GRCh38/hg38)
Size:
771 bases
Orientation:
Minus strand
chr19:39,335,369-39,336,139
(GRCh37/hg19)
Size:
771 bases
Orientation:
Minus strand

Genomic View for ENSG00000269688 Gene

Genes around ENSG00000269688 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269688 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269688 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269688 Gene

Proteins for ENSG00000269688 Gene

Post-translational modifications for ENSG00000269688 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269688 Gene

Domains & Families for ENSG00000269688 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269688 Gene

Function for ENSG00000269688 Gene

Phenotypes From GWAS Catalog for ENSG00000269688 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269688 Gene

Localization for ENSG00000269688 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269688 Gene

Pathways & Interactions for ENSG00000269688 Gene

PathCards logo

SuperPathways for ENSG00000269688 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000269688 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269688 Gene

Drugs & Compounds for ENSG00000269688 Gene

No Compound Related Data Available

Transcripts for ENSG00000269688 Gene

mRNA/cDNA for ENSG00000269688 Gene

1 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269688 Gene

No ASD Table

Relevant External Links for ENSG00000269688 Gene

GeneLoc Exon Structure for
ENSG00000269688

Expression for ENSG00000269688 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269688 Gene

genes like me logo Genes that share expression patterns with ENSG00000269688: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269688 Gene

Orthologs for ENSG00000269688 Gene

Evolution for ENSG00000269688 Gene

ENSEMBL:
Gene Tree for ENSG00000269688 (if available)
TreeFam:
Gene Tree for ENSG00000269688 (if available)

No data available for Orthologs for ENSG00000269688 Gene

Paralogs for ENSG00000269688 Gene

No data available for Paralogs for ENSG00000269688 Gene

Variants for ENSG00000269688 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269688 Gene

Disorders for ENSG00000269688 Gene

No disorders were found for ENSG00000269688 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269688 Gene

Publications for ENSG00000269688 Gene

No publications were found for ENSG00000269688 Gene.

No data available for Mastermind for ENSG00000269688 Gene

Products for ENSG00000269688 Gene

Sources for ENSG00000269688 Gene