Aliases for ENSG00000269667 Gene

Subcategory (RNA class) for ENSG00000269667 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000269667 Gene

  • Novel Transcript 5
  • NONHSAG020204.2 91
  • HSALNG0113259 164
  • AC092723.1 5
  • Lnc-IRF8-5 165

External Ids for ENSG00000269667 Gene

Summaries for ENSG00000269667 Gene

GeneCards Summary for ENSG00000269667 Gene

ENSG00000269667 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269667 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269667 Gene

Genomics for ENSG00000269667 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000269667 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085982 Enhancer 0.7 FANTOM5 ENCODE 600.7 +0.7 733 0.9 SPI1 CEBPB POLR2A MYC MAX ENSG00000269667 IRF8 COX4I1 ENSG00000285040 FOXF1
GH16J085985 Promoter 0.3 Ensembl 600.7 +1.6 1551 0.2 ENSG00000269667 ENSG00000285040 IRF8 FOXF1
GH16J085983 Promoter/Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.7 +3.2 3212 2.7 RELA RUNX3 USF1 YY1 BHLHE40 POLR2A ETV6 ZBED1 ENSG00000285040 IRF8 ENSG00000269667 FOXF1
GH16J085978 Promoter/Enhancer 0.6 FANTOM5 Ensembl 0.7 -3.1 -3149 0.8 SPI1 IRF8 COX4I1 ENSG00000269667 piR-58538-016 ENSG00000285040 FOXF1
GH16J085974 Enhancer 0.7 Ensembl ENCODE 0.4 -6.5 -6531 2.2 SP1 FOXA2 YY1 NR2F2 RAD21 HNF4A RXRA NR2F6 NR3C1 piR-58538-006 piR-58538-007 piR-58538-008 piR-58538-009 piR-58538-010 piR-58538-011 piR-58538-012 piR-58538-013 piR-58538-014 piR-58538-015
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269667 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000269667 Gene

Genomic Locations for ENSG00000269667 Gene
chr16:85,981,750-85,984,881
(GRCh38/hg38)
Size:
3,132 bases
Orientation:
Plus strand
chr16:86,015,356-86,018,329
(GRCh37/hg19)
Size:
2,974 bases
Orientation:
Plus strand

Genomic View for ENSG00000269667 Gene

Genes around ENSG00000269667 on UCSC Golden Path with GeneCards custom track
ENSG00000269667 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000269667 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269667 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269667 Gene

Proteins for ENSG00000269667 Gene

Post-translational modifications for ENSG00000269667 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269667 Gene

Domains & Families for ENSG00000269667 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269667 Gene

Function for ENSG00000269667 Gene

Phenotypes From GWAS Catalog for ENSG00000269667 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269667 Gene

Localization for ENSG00000269667 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269667 Gene

Pathways & Interactions for ENSG00000269667 Gene

PathCards logo

SuperPathways for ENSG00000269667 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000269667 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269667 Gene

Drugs & Compounds for ENSG00000269667 Gene

No Compound Related Data Available

Transcripts for ENSG00000269667 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000269667 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000D63DCE_9606 lncRNA 632 2

Ensembl: ENST00000599411 (view in UCSC) ,

LNCipedia: lnc-IRF8-5:2,

URS00000D3A45_9606 lncRNA 474 3

LncBook: HSALNT0234718,

LNCipedia: lnc-IRF8-5:1,

NONCODE: NONHSAT144158.2,

ENSG00000269667 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269667 Gene

No ASD Table

Relevant External Links for ENSG00000269667 Gene

GeneLoc Exon Structure for
ENSG00000269667

No data available for mRNA/cDNA for ENSG00000269667 Gene

Expression for ENSG00000269667 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269667 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269667 Gene

This gene is overexpressed in Colon - Transverse (x32.6) and Small Intestine - Terminal Ileum (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000269667: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269667 Gene

Orthologs for ENSG00000269667 Gene

Evolution for ENSG00000269667 Gene

ENSEMBL:
Gene Tree for ENSG00000269667 (if available)
TreeFam:
Gene Tree for ENSG00000269667 (if available)

No data available for Orthologs for ENSG00000269667 Gene

Paralogs for ENSG00000269667 Gene

No data available for Paralogs for ENSG00000269667 Gene

Variants for ENSG00000269667 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269667 Gene

Disorders for ENSG00000269667 Gene

Additional Disease Information for ENSG00000269667

No disorders were found for ENSG00000269667 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000269667 Gene

Publications for ENSG00000269667 Gene

No publications were found for ENSG00000269667 Gene.

No data available for Mastermind for ENSG00000269667 Gene

Products for ENSG00000269667 Gene

Sources for ENSG00000269667 Gene