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Aliases for ENSG00000269604 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000269604 Gene

  • Novel Transcript, Antisense To FEM1A 5
  • AC005523.2 5

External Ids for ENSG00000269604 Gene

Summaries for ENSG00000269604 Gene

GeneCards Summary for ENSG00000269604 Gene

ENSG00000269604 is an RNA Gene. Diseases associated with ENSG00000269604 include Melanoma.

Additional gene information for ENSG00000269604 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000269604 Gene

Genomics for ENSG00000269604 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269604 Gene

Promoters and enhancers for ENSG00000269604 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J004794 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +0.5 492 2 PRDM10 SCRT2 SCRT1 ENSG00000269604 ENSG00000268536 FEM1A GC19P004792
GH19J004790 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 0.7 +3.8 3807 2.7 CC2D1A SP1 ZFX CTCF ZKSCAN8 MNT SIX5 ZNF148 NKRF MLLT1 ENSG00000268536 FEM1A GC19P004792 DUS3L DPP9-AS1 ENSG00000267030 YJU2 SAFB2 SNRPEP4 ENSG00000267255
GH19J004828 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 -35.6 -35607 4.6 ZFX ZKSCAN8 ZNF148 NKRF MLLT1 CEBPG POLR2A ZNF687 ZSCAN21 SP7 TICAM1 GC19P004832 SAFB2 PLIN3 SAFB ARRDC5 FEM1A MIR7-3 MIR7-3HG SNRPEP4
GH19J004811 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.4 -17.2 -17153 2.4 CC2D1A CTCF MNT NKRF MLLT1 ZNF121 ZNF384 ZNF687 AHR CDC5L TICAM1 SEMA6B SNRPEP4 DUS3L PLIN3 YJU2 ENSG00000269604
GH19J004799 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.8 -5784 3.7 ZNF121 CEBPG NCOA3 SP1 CTBP1 CEBPB POLR2A KLF4 ESRRA FOXA2 PLIN3 PTPRS ENSG00000268536 TICAM1 MIR7-3HG ENSG00000269604 FEM1A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269604 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269604 Gene

Genomic Locations for ENSG00000269604 Gene
chr19:4,791,745-4,795,559
(GRCh38/hg38)
Size:
3,815 bases
Orientation:
Minus strand
chr19:4,791,757-4,795,571
(GRCh37/hg19)
Size:
3,815 bases
Orientation:
Minus strand

Genomic View for ENSG00000269604 Gene

Genes around ENSG00000269604 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269604 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269604 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269604 Gene

Proteins for ENSG00000269604 Gene

Post-translational modifications for ENSG00000269604 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269604 Gene

Domains & Families for ENSG00000269604 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000269604 Gene

Function for ENSG00000269604 Gene

Phenotypes From GWAS Catalog for ENSG00000269604 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269604 Gene

Localization for ENSG00000269604 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269604 Gene

Pathways & Interactions for ENSG00000269604 Gene

PathCards logo

SuperPathways for ENSG00000269604 Gene

No Data Available

Interacting Proteins for ENSG00000269604 Gene

Gene Ontology (GO) - Biological Process for ENSG00000269604 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269604 Gene

Drugs & Compounds for ENSG00000269604 Gene

No Compound Related Data Available

Transcripts for ENSG00000269604 Gene

mRNA/cDNA for ENSG00000269604 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269604 Gene

No ASD Table

Relevant External Links for ENSG00000269604 Gene

GeneLoc Exon Structure for
ENSG00000269604

Expression for ENSG00000269604 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269604 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269604 Gene

This gene is overexpressed in Muscle - Skeletal (x20.8).
genes like me logo Genes that share expression patterns with ENSG00000269604: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269604 Gene

Orthologs for ENSG00000269604 Gene

Evolution for ENSG00000269604 Gene

ENSEMBL:
Gene Tree for ENSG00000269604 (if available)
TreeFam:
Gene Tree for ENSG00000269604 (if available)

No data available for Orthologs for ENSG00000269604 Gene

Paralogs for ENSG00000269604 Gene

No data available for Paralogs for ENSG00000269604 Gene

Variants for ENSG00000269604 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269604 Gene

Disorders for ENSG00000269604 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000269604 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
melanoma
  • malignant melanoma
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000269604: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269604 Gene

Publications for ENSG00000269604 Gene

No publications were found for ENSG00000269604 Gene.

No data available for External Links for ENSG00000269604 Gene

Products for ENSG00000269604 Gene

Sources for ENSG00000269604 Gene

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