Aliases for ENSG00000269588 Gene

Aliases for ENSG00000269588 Gene

  • Lectin, Galactoside-Binding, Soluble, 13 (LGALS13) Pseudogene 5
  • AC011500.2 5

External Ids for ENSG00000269588 Gene

Previous GeneCards Identifiers for ENSG00000269588 Gene

  • GC19P040043

Summaries for ENSG00000269588 Gene

GeneCards Summary for ENSG00000269588 Gene

ENSG00000269588 is a Pseudogene.

Additional gene information for ENSG00000269588 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269588 Gene

Genomics for ENSG00000269588 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269588 Gene

Promoters and enhancers for ENSG00000269588 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J039553 Enhancer 0.7 FANTOM5 ENCODE 750.6 -0.5 -514 0.3 IKZF1 IKZF2 SCRT2 RUNX3 ENSG00000269588 PLEKHG2 ZFP36 DLL3 TIMM50 RPS16 MED29 PAF1 EID2 LOC105372399
GH19J039551 Enhancer 0.7 ENCODE 750.6 -1.4 -1418 0.2 CTCF ZNF362 CC2D1A RAD21 ZNF384 PRDM1 REST TRIM22 ZNF692 ZNF524 ENSG00000269588 DLL3 TIMM50 PLEKHG2 ZFP36 LOC105372399
GH19J039552 Promoter 0.5 Ensembl 750.6 -0.9 -933 0.2 CTCF SCRT2 ENSG00000269588 DLL3 TIMM50 PLEKHG2 ZFP36 LOC105372399
GH19J039397 Promoter/Enhancer 3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 14.7 -146.0 -145959 20 PPP1R10 E2F8 GTF3C2 ZNF785 SIN3A ZNF24 SP1 ZBTB40 CTCF SREBF1 ZFP36 PAF1 5EW4_A-031 MG828566 HNRNPL FBL ENSG00000269688 SUPT5H RPS16 PLEKHG2
GH19J039427 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 14.7 -120.6 -120618 10 ZNF785 SIN3A SP1 ZBTB40 ZBTB6 FOXA1 MLX SMARCE1 RBPJ POLR2A RPS16 HNRNPL SUPT5H ZNF780B AKT2 PAF1 PLEKHG2 FBL EID2B ZNF780A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269588 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269588 Gene

Genomic Locations for ENSG00000269588 Gene
chr19:39,553,034-39,555,356
(GRCh38/hg38)
Size:
2,323 bases
Orientation:
Plus strand
chr19:40,043,674-40,045,996
(GRCh37/hg19)
Size:
2,323 bases
Orientation:
Plus strand

Genomic View for ENSG00000269588 Gene

Genes around ENSG00000269588 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269588 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269588 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269588 Gene

Proteins for ENSG00000269588 Gene

Post-translational modifications for ENSG00000269588 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269588 Gene

Domains & Families for ENSG00000269588 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269588 Gene

Function for ENSG00000269588 Gene

Phenotypes From GWAS Catalog for ENSG00000269588 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269588 Gene

Localization for ENSG00000269588 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269588 Gene

Pathways & Interactions for ENSG00000269588 Gene

PathCards logo

SuperPathways for ENSG00000269588 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000269588 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269588 Gene

Drugs & Compounds for ENSG00000269588 Gene

No Compound Related Data Available

Transcripts for ENSG00000269588 Gene

mRNA/cDNA for ENSG00000269588 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269588 Gene

No ASD Table

Relevant External Links for ENSG00000269588 Gene

GeneLoc Exon Structure for
ENSG00000269588

Expression for ENSG00000269588 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269588 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269588 Gene

This gene is overexpressed in Testis (x31.7), Brain - Nucleus accumbens (basal ganglia) (x7.2), Brain - Frontal Cortex (BA9) (x7.1), and Brain - Cortex (x6.9).
genes like me logo Genes that share expression patterns with ENSG00000269588: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269588 Gene

Orthologs for ENSG00000269588 Gene

Evolution for ENSG00000269588 Gene

ENSEMBL:
Gene Tree for ENSG00000269588 (if available)
TreeFam:
Gene Tree for ENSG00000269588 (if available)

No data available for Orthologs for ENSG00000269588 Gene

Paralogs for ENSG00000269588 Gene

No data available for Paralogs for ENSG00000269588 Gene

Variants for ENSG00000269588 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269588 Gene

Disorders for ENSG00000269588 Gene

No disorders were found for ENSG00000269588 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269588 Gene

Publications for ENSG00000269588 Gene

No publications were found for ENSG00000269588 Gene.

No data available for External Links for ENSG00000269588 Gene

Products for ENSG00000269588 Gene

Sources for ENSG00000269588 Gene