Aliases for ENSG00000269578 Gene

Subcategory (RNA class) for ENSG00000269578 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000269578 Gene

  • Novel Transcript, Sense Intronic MED26 5
  • NONHSAG025049 92
  • Lnc-SLC35E1-3 168
  • AC008764.7 5

External Ids for ENSG00000269578 Gene

Previous GeneCards Identifiers for ENSG00000269578 Gene

  • GC19M016699

Summaries for ENSG00000269578 Gene

GeneCards Summary for ENSG00000269578 Gene

ENSG00000269578 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269578 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269578 Gene

Genomics for ENSG00000269578 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269578 Gene

Promoters and enhancers for ENSG00000269578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J017333 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 91.6 -748.1 -748108 6.2 HNRNPK ZBTB40 ZNF217 EP300 CTCF ZSCAN5C SIN3A NRF1 TCF12 MYC GTPBP3 ANO8 HSALNG0124507 lnc-DDA1-1 CHERP ENSG00000268743 C19orf44 ENSG00000269578 IQCN SIN3B
GH19J015826 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 47.3 +755.2 755220 12.9 ZBTB40 ZNF217 NRF1 POLR2G SP1 GTF2E2 PHF8 PHB2 ZFX ZBTB5 ENSG00000273782 AKAP8 ENSG00000269578 BRD4 TPM4 SIN3B CHERP CYP4F24P UCA1 OR10H4
GH19J017106 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 60.9 -521.2 -521205 4.4 SIN3A TCF12 SP1 RBAK JUND FOS ZNF639 ZNF354C EP300 ZIC2 ENSG00000268743 CHERP C19orf44 ENSG00000269578 ENSG00000267904 ENSG00000268087 SIN3B GTPBP3 MYO9B ENSG00000269439
GH19J017552 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 27.7 -967.0 -967033 4.8 EP300 NRF1 SP1 JUND ZNF639 ZIC2 POLR2A ZNF623 AFF1 ZBTB26 COLGALT1 MVB12A ENSG00000269578 ENSG00000267904 ENSG00000268087 ENSG00000268743 ENSG00000268938 ENSG00000269191 PGLS GTPBP3
GH19J017072 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 24.9 -489.3 -489269 8.6 FOXK2 HNRNPK ZNF217 EP300 CTCF SIN3A TCF12 NRF1 POLR2G USF1 HAUS8 MYO9B CHERP ENSG00000269578 SIN3B ENSG00000269044 ENSG00000268743 ENSG00000267904 MED26 ENSG00000268087
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269578 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269578 Gene

Genomic Locations for ENSG00000269578 Gene
chr19:16,586,905-16,587,985
(GRCh38/hg38)
Size:
1,081 bases
Orientation:
Minus strand
chr19:16,697,716-16,698,796
(GRCh37/hg19)
Size:
1,081 bases
Orientation:
Minus strand

Genomic View for ENSG00000269578 Gene

Genes around ENSG00000269578 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269578 Gene

Proteins for ENSG00000269578 Gene

Post-translational modifications for ENSG00000269578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269578 Gene

Domains & Families for ENSG00000269578 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269578 Gene

Function for ENSG00000269578 Gene

Phenotypes From GWAS Catalog for ENSG00000269578 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269578 Gene

Localization for ENSG00000269578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269578 Gene

Pathways & Interactions for ENSG00000269578 Gene

PathCards logo

SuperPathways for ENSG00000269578 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000269578 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269578 Gene

Drugs & Compounds for ENSG00000269578 Gene

No Compound Related Data Available

Transcripts for ENSG00000269578 Gene

mRNA/cDNA for ENSG00000269578 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269578 Gene

No ASD Table

Relevant External Links for ENSG00000269578 Gene

GeneLoc Exon Structure for
ENSG00000269578

Expression for ENSG00000269578 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269578 Gene

genes like me logo Genes that share expression patterns with ENSG00000269578: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269578 Gene

Orthologs for ENSG00000269578 Gene

Evolution for ENSG00000269578 Gene

ENSEMBL:
Gene Tree for ENSG00000269578 (if available)
TreeFam:
Gene Tree for ENSG00000269578 (if available)

No data available for Orthologs for ENSG00000269578 Gene

Paralogs for ENSG00000269578 Gene

No data available for Paralogs for ENSG00000269578 Gene

Variants for ENSG00000269578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269578 Gene

Disorders for ENSG00000269578 Gene

No disorders were found for ENSG00000269578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269578 Gene

Publications for ENSG00000269578 Gene

No publications were found for ENSG00000269578 Gene.

No data available for Mastermind for ENSG00000269578 Gene

Products for ENSG00000269578 Gene

Sources for ENSG00000269578 Gene