Aliases for ENSG00000269535 Gene

Data sources for ENSG00000269535 Gene:

Subcategory (RNA class) for ENSG00000269535 Gene

lncRNA

Aliases for ENSG00000269535 Gene

External Ids for ENSG00000269535 Gene

Previous GeneCards Identifiers for ENSG00000269535 Gene

  • GC19M052807

Summaries for ENSG00000269535 Gene

GeneCards Summary for ENSG00000269535 Gene

ENSG00000269535 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269535 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269535 Gene

Genomics for ENSG00000269535 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000269535 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J052343 Enhancer 0.6 ENCODE 250.7 +1.5 1506 0.2 CTCF SIN3A REST SMC3 YY1 MAX NR2F1 RAD21 ESRRA ZNF143 ENSG00000269535 ZNF610 lnc-ZNF480-2 ZNF880
GH19J052344 Enhancer 0.6 Ensembl 250.7 +1.3 1329 0.2 CTCF SIN3A REST SMC3 YY1 MAX NR2F1 RAD21 ESRRA ZNF143 ENSG00000269535 ZNF610 lnc-ZNF480-2 ZNF880
GH19J051687 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 40.6 +654.7 654738 6.9 ZSCAN16 ZBTB10 FEZF1 NR2C1 MNT IKZF1 SMAD5 MBD2 ZBTB7B ZEB1 SPACA6 ZNF137P ZNF808 ZNF841 ZNF577 ZNF616 ZNF766 ZNF175 ENSG00000268970 ZNF836
GH19J052138 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 20.4 +205.8 205785 3.7 TBP SP1 ZBTB10 MXD4 CEBPA NR2C1 MNT IKZF1 SMAD5 ETS1 ZNF616 ZNF137P ZNF160 ZNF350 ZNF808 ENSG00000268970 ZNF600 ZNF816 ZNF836 ZNF577
GH19J051360 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.7 +976.7 976668 15.8 ZSCAN16 CHD2 TBP ZBTB10 SP1 MXD4 CEBPA NR2C1 FOXA1 MNT ETFB CLDND2 ENSG00000269403 HSALNG0127209 NKG7 NONHSAG026361.2 ZNF841 ZNF175 ZNF616 ZNF577
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269535 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000269535 Gene

Latest Assembly
chr19:52,300,692-52,345,229
(GRCh38/hg38)
Size:
44,538 bases
Orientation:
Minus strand

Previous Assembly
chr19:52,803,946-52,848,482
(GRCh37/hg19 by Ensembl)
Size:
44,537 bases
Orientation:
Minus strand

Genomic View for ENSG00000269535 Gene

Genes around ENSG00000269535 on UCSC Golden Path with GeneCards custom track
ENSG00000269535 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000269535 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269535 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269535 Gene

Proteins for ENSG00000269535 Gene

Post-translational modifications for ENSG00000269535 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269535 Gene

Domains & Families for ENSG00000269535 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269535 Gene

Function for ENSG00000269535 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269535 Gene

Localization for ENSG00000269535 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269535 Gene

Pathways & Interactions for ENSG00000269535 Gene

PathCards logo

SuperPathways for ENSG00000269535 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000269535 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269535 Gene

Drugs & Compounds for ENSG00000269535 Gene

No Compound Related Data Available

Transcripts for ENSG00000269535 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000269535 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000043C0BD_9606 lncRNA 1905 3

Ensembl: ENST00000594379 (view in UCSC) ,

LNCipedia: lnc-ZNF836-4:1,

NONCODE: NONHSAT067535.2,

URS00009BEEC7_9606 lncRNA 255 2

LncBook: HSALNT0261881,

NONCODE: NONHSAT180553.1,

URS0001BDD9CC_9606 lncRNA 279 1

LncBook: HSALNT0261882,

URS0001BF2E88_9606 lncRNA 255 1

LncBook: HSALNT0261881,

ENSG00000269535 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269535 Gene

No ASD Table

Relevant External Links for ENSG00000269535 Gene

GeneLoc Exon Structure for
ENSG00000269535

No data available for mRNA/cDNA for ENSG00000269535 Gene

Expression for ENSG00000269535 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269535 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269535 Gene

This gene is overexpressed in Testis (x18.0).
genes like me logo Genes that share expression patterns with ENSG00000269535: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269535 Gene

Orthologs for ENSG00000269535 Gene

Evolution for ENSG00000269535 Gene

ENSEMBL:
Gene Tree for ENSG00000269535 (if available)
TreeFam:
Gene Tree for ENSG00000269535 (if available)

No data available for Orthologs for ENSG00000269535 Gene

Paralogs for ENSG00000269535 Gene

No data available for Paralogs for ENSG00000269535 Gene

Variants for ENSG00000269535 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269535 Gene

Disorders for ENSG00000269535 Gene

No disorders were found for ENSG00000269535 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269535 Gene

Publications for ENSG00000269535 Gene

No publications were found for ENSG00000269535 Gene.

No data available for Mastermind for ENSG00000269535 Gene

Products for ENSG00000269535 Gene

Sources for ENSG00000269535 Gene