Aliases for ENSG00000269481 Gene

Subcategory (RNA class) for ENSG00000269481 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000269481 Gene

  • Novel Transcript, Antisense FAM125A 5
  • NONHSAG025089.2 91
  • AC010319.4 5
  • Lnc-BST2-4 165

External Ids for ENSG00000269481 Gene

Previous GeneCards Identifiers for ENSG00000269481 Gene

  • GC19M017525

Summaries for ENSG00000269481 Gene

GeneCards Summary for ENSG00000269481 Gene

ENSG00000269481 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269481 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269481 Gene

Genomics for ENSG00000269481 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000269481 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J018372 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 18.7 -958.9 -958938 18.3 SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 PRDM10 ZNF629 REST TFE3 GDF15 NR2C2AP ENSG00000268030 IQCN UPF1 MAU2 ENSG00000268938 SUGP2 ENSG00000269191 COLGALT1
GH19J018414 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.5 -996.3 -996311 9.3 RNF2 HNRNPL GATAD2A PRDM10 ZNF629 TFE3 RFX1 LEF1 IKZF1 NFKBIZ SSBP4 NONHSAG025131.2 MAU2 NR2C2AP ENSG00000268030 UPF1 IQCN ENSG00000268938 ENSG00000269191 COLGALT1
GH19J017072 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10 +345.1 345070 8.6 ZNF221 SP1 HNRNPL CREB1 ATF7 PRDM10 ZNF629 SIX5 IKZF1 NFKBIZ HAUS8 MYO9B SIN3B ENSG00000269044 MED26 CPAMD8 ENSG00000269578 ENSG00000269481 ENSG00000268743 CHERP
GH19J017333 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.1 +86.2 86231 6.2 ZNF221 SP1 HNRNPL CREB1 GATAD2A TEAD4 PRDM10 ZNF629 ZNF512 SIX5 GTPBP3 ANO8 HSALNG0124507 lnc-DDA1-1 CHERP ENSG00000269578 ENSG00000268743 IQCN C19orf44 SIN3B
GH19J017946 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 10.5 -527.0 -527027 4.8 PRDM10 ZNF629 RFX1 BACH1 LARP7 ZNF143 MTA2 ZIC2 POLR2A MTA1 KCNN1 5EW4_A-027 UPF1 ENSG00000268030 IQCN ENSG00000268938 ENSG00000269191 CCDC124 ENSG00000269481 HAUS8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269481 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000269481 Gene

Genomic Locations for ENSG00000269481 Gene
chr19:17,414,257-17,422,324
(GRCh38/hg38)
Size:
8,068 bases
Orientation:
Minus strand
chr19:17,525,066-17,533,133
(GRCh37/hg19)
Size:
8,068 bases
Orientation:
Minus strand

Genomic View for ENSG00000269481 Gene

Genes around ENSG00000269481 on UCSC Golden Path with GeneCards custom track
ENSG00000269481 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000269481 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269481 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269481 Gene

Proteins for ENSG00000269481 Gene

Post-translational modifications for ENSG00000269481 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269481 Gene

Domains & Families for ENSG00000269481 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269481 Gene

Function for ENSG00000269481 Gene

Phenotypes From GWAS Catalog for ENSG00000269481 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269481 Gene

Localization for ENSG00000269481 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269481 Gene

Pathways & Interactions for ENSG00000269481 Gene

PathCards logo

SuperPathways for ENSG00000269481 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000269481 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269481 Gene

Drugs & Compounds for ENSG00000269481 Gene

No Compound Related Data Available

Transcripts for ENSG00000269481 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000269481 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000F506D_9606 lncRNA 691 3

Ensembl: ENST00000593957 (view in UCSC) ,

LNCipedia: lnc-BST2-4:1,

NONCODE: NONHSAT062884.2,

ENSG00000269481 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269481 Gene

No ASD Table

Relevant External Links for ENSG00000269481 Gene

GeneLoc Exon Structure for
ENSG00000269481

No data available for mRNA/cDNA for ENSG00000269481 Gene

Expression for ENSG00000269481 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269481 Gene

genes like me logo Genes that share expression patterns with ENSG00000269481: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269481 Gene

Orthologs for ENSG00000269481 Gene

Evolution for ENSG00000269481 Gene

ENSEMBL:
Gene Tree for ENSG00000269481 (if available)
TreeFam:
Gene Tree for ENSG00000269481 (if available)

No data available for Orthologs for ENSG00000269481 Gene

Paralogs for ENSG00000269481 Gene

No data available for Paralogs for ENSG00000269481 Gene

Variants for ENSG00000269481 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269481 Gene

Disorders for ENSG00000269481 Gene

No disorders were found for ENSG00000269481 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269481 Gene

Publications for ENSG00000269481 Gene

No publications were found for ENSG00000269481 Gene.

No data available for Mastermind for ENSG00000269481 Gene

Products for ENSG00000269481 Gene

Sources for ENSG00000269481 Gene