Aliases for ENSG00000269243 Gene

Subcategory (RNA class) for ENSG00000269243 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000269243 Gene

  • Novel Transcript, Antisense RAB8A 5
  • NONHSAG025026 92
  • HSALNG0124421 167
  • AC008894.2 5
  • Lnc-CIB3-1 168

External Ids for ENSG00000269243 Gene

Previous GeneCards Identifiers for ENSG00000269243 Gene

  • GC19M016237

Summaries for ENSG00000269243 Gene

GeneCards Summary for ENSG00000269243 Gene

ENSG00000269243 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269243 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269243 Gene

Genomics for ENSG00000269243 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269243 Gene

Promoters and enhancers for ENSG00000269243 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J016833 Enhancer 0.9 Ensembl ENCODE 5 -695.2 -695154 3.7 CTCF REST RAD21 TRIM22 SMC3 TCF12 ZNF316 NFIC MAFK SMARCA5 SIN3B ENSG00000269243 RF00017-2874 ENSG00000268743
GH19J016139 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.8 -3768 9 ZNF217 POLR2G SP1 EP300 POLR2A CTCF RELA MEF2C CUX1 MYC HSH2D RAB8A EPS15L1 ENSG00000269243 lnc-EPS15L1-5
GH19J016160 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -20.7 -20730 4 ZNF217 CTCF JUND FOS EP300 GATAD2B CTBP1 RBM25 OSR2 ESRRA AP1M1 KLF2 CIB3 lnc-EPS15L1-5 ENSG00000269243
GH19J016172 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 0.3 -33.1 -33095 2 ZNF217 GATAD2B CTBP1 RBM25 ESRRA MYC CTCF MBD2 ZNF207 NEUROD1 CIB3 lnc-EPS15L1-5 AP1M1 ENSG00000269243
GH19J016168 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.3 -29309 3.2 USF1 USF2 NFYB RBM25 RAD51 SMARCC2 SPI1 BCOR ZNF280A CBX1 OR10H3 OR10H2 KLF2 AP1M1 OR10H4 CIB3 lnc-EPS15L1-5 ENSG00000269243
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269243 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269243 Gene

Genomic Locations for ENSG00000269243 Gene
chr19:16,123,661-16,139,892
(GRCh38/hg38)
Size:
16,232 bases
Orientation:
Minus strand
chr19:16,234,471-16,250,702
(GRCh37/hg19)
Size:
16,232 bases
Orientation:
Minus strand

Genomic View for ENSG00000269243 Gene

Genes around ENSG00000269243 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269243 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269243 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269243 Gene

Proteins for ENSG00000269243 Gene

Post-translational modifications for ENSG00000269243 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269243 Gene

Domains & Families for ENSG00000269243 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269243 Gene

Function for ENSG00000269243 Gene

Phenotypes From GWAS Catalog for ENSG00000269243 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269243 Gene

Localization for ENSG00000269243 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269243 Gene

Pathways & Interactions for ENSG00000269243 Gene

PathCards logo

SuperPathways for ENSG00000269243 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000269243 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269243 Gene

Drugs & Compounds for ENSG00000269243 Gene

No Compound Related Data Available

Transcripts for ENSG00000269243 Gene

mRNA/cDNA for ENSG00000269243 Gene

5 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269243 Gene

No ASD Table

Relevant External Links for ENSG00000269243 Gene

GeneLoc Exon Structure for
ENSG00000269243

Expression for ENSG00000269243 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269243 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269243 Gene

This gene is overexpressed in Whole Blood (x5.1).
genes like me logo Genes that share expression patterns with ENSG00000269243: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269243 Gene

Orthologs for ENSG00000269243 Gene

Evolution for ENSG00000269243 Gene

ENSEMBL:
Gene Tree for ENSG00000269243 (if available)
TreeFam:
Gene Tree for ENSG00000269243 (if available)

No data available for Orthologs for ENSG00000269243 Gene

Paralogs for ENSG00000269243 Gene

No data available for Paralogs for ENSG00000269243 Gene

Variants for ENSG00000269243 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269243 Gene

Disorders for ENSG00000269243 Gene

No disorders were found for ENSG00000269243 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269243 Gene

Publications for ENSG00000269243 Gene

No publications were found for ENSG00000269243 Gene.

No data available for Mastermind for ENSG00000269243 Gene

Products for ENSG00000269243 Gene

Sources for ENSG00000269243 Gene