Aliases for ENSG00000269242 Gene

Aliases for ENSG00000269242 Gene

  • Glyco_hydro38C2 Domain-Containing Protein 13
  • Novel Transcript 5
  • AC010422.3 5

External Ids for ENSG00000269242 Gene

Previous GeneCards Identifiers for ENSG00000269242 Gene

  • GC19M012760
  • GC19M012764
  • GC19M012645
  • GC19M012650
  • GC19M012652

Summaries for ENSG00000269242 Gene

GeneCards Summary for ENSG00000269242 Gene

ENSG00000269242 is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include carbohydrate binding and mannosidase activity. An important paralog of this gene is MAN2B1.

Additional gene information for ENSG00000269242 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269242 Gene

Genomics for ENSG00000269242 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000269242 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J012647 Promoter/Enhancer 0.9 Ensembl ENCODE 600.7 +0.3 318 1.4 CTCF KDM1A PKNOX1 REST NRF1 KLF9 EGR1 HDGF KLF8 ZNF664 ENSG00000269242 lnc-ZNF490-2 PGK1P2 TNPO2 ZNF490 MAN2B1 RF00017-2826 MN298114-106
GH19J012639 Promoter/Enhancer 1.2 Ensembl ENCODE 0.4 +8.2 8163 0.9 GATAD2A CTCF NFKBIZ KDM1A LARP7 ZNF143 REST RAD21 IRF2 POLR2A LOC105372279 ZNF490 lnc-ZNF490-1 ENSG00000269242 RF00017-2826 MN298114-106
GH19J012656 Enhancer 0.6 ENCODE 0.4 -8.8 -8820 0.8 CTCF SP2 USF1 NFIC ATF3 ZBTB33 POLR2A SP3 RAD21 SP1 lnc-WDR83OS-3 MAN2B1 ZNF490 ENSG00000269242 MN298114-106 RF00017-2826
GH19J012643 Promoter 0.3 Ensembl 0.7 +4.6 4596 0.4 RPL10P16 lnc-MAN2B1-1 lnc-ZNF791-3 ENSG00000269242 ZNF490 RF00017-2826 MN298114-106
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269242 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000269242 Gene

Genomic Locations for ENSG00000269242 Gene
chr19:12,643,831-12,648,397
(GRCh38/hg38)
Size:
4,567 bases
Orientation:
Minus strand
chr19:12,754,645-12,759,211
(GRCh37/hg19)
Size:
4,567 bases
Orientation:
Minus strand

Genomic View for ENSG00000269242 Gene

Genes around ENSG00000269242 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269242 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269242 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269242 Gene

Proteins for ENSG00000269242 Gene

  • Protein details for ENSG00000269242 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    M0QZ24-M0QZ24_HUMAN
    Recommended name:
    Glyco_hydro38C2 domain-containing protein
    Protein Accession:
    M0QZ24

    Protein attributes for ENSG00000269242 Gene

    Size:
    198 amino acids
    Molecular mass:
    21655 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000269242 Gene

Post-translational modifications for ENSG00000269242 Gene

No Post-translational modifications

Other Protein References for ENSG00000269242 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000269242 Gene

Domains & Families for ENSG00000269242 Gene

Protein Domains for ENSG00000269242 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ENSG00000269242: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269242 Gene

Function for ENSG00000269242 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000269242 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003824 catalytic activity IEA --
GO:0004559 alpha-mannosidase activity IBA --
GO:0030246 carbohydrate binding IEA --
genes like me logo Genes that share ontologies with ENSG00000269242: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269242 Gene

Localization for ENSG00000269242 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000269242 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005774 vacuolar membrane IBA --
genes like me logo Genes that share ontologies with ENSG00000269242: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000269242 Gene

Pathways & Interactions for ENSG00000269242 Gene

PathCards logo

SuperPathways for ENSG00000269242 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000269242 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005975 carbohydrate metabolic process IEA --
GO:0006013 mannose metabolic process IBA --
GO:0006517 protein deglycosylation IBA --
genes like me logo Genes that share ontologies with ENSG00000269242: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000269242 Gene

Drugs & Compounds for ENSG00000269242 Gene

No Compound Related Data Available

Transcripts for ENSG00000269242 Gene

mRNA/cDNA for ENSG00000269242 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269242 Gene

No ASD Table

Relevant External Links for ENSG00000269242 Gene

GeneLoc Exon Structure for
ENSG00000269242

Expression for ENSG00000269242 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000269242 Gene

genes like me logo Genes that share expression patterns with ENSG00000269242: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269242 Gene

Orthologs for ENSG00000269242 Gene

This gene was present in the common ancestor of animals.

Orthologs for ENSG00000269242 Gene

Organism Taxonomy Gene Similarity Type Details
Dog
(Canis familiaris)
Mammalia -- 31
  • 15 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia MANB 31
  • 15 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Man2b1 31
  • 14 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 13 (a)
OneToMany
Chimpanzee
(Pan troglodytes)
Mammalia MAN2B1 31
OneToMany
Lizard
(Anolis carolinensis)
Reptilia -- 31
  • 10 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii man2b1 31
  • 8 (a)
OneToMany
Fruit Fly
(Drosophila melanogaster)
Insecta CG9468 31
  • 6 (a)
ManyToMany
CG6206 31
  • 6 (a)
ManyToMany
CG9466 31
  • 6 (a)
ManyToMany
CG5322 31
  • 6 (a)
ManyToMany
CG9465 31
  • 6 (a)
ManyToMany
CG9463 31
  • 5 (a)
ManyToMany
Worm
(Caenorhabditis elegans)
Secernentea aman-1 31
  • 5 (a)
OneToMany
Sea Squirt
(Ciona savignyi)
Ascidiacea -- 31
  • 7 (a)
OneToMany
Species where no ortholog for ENSG00000269242 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)

Evolution for ENSG00000269242 Gene

ENSEMBL:
Gene Tree for ENSG00000269242 (if available)
TreeFam:
Gene Tree for ENSG00000269242 (if available)

Paralogs for ENSG00000269242 Gene

Paralogs for ENSG00000269242 Gene

genes like me logo Genes that share paralogs with ENSG00000269242: view

Variants for ENSG00000269242 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269242 Gene

Disorders for ENSG00000269242 Gene

No disorders were found for ENSG00000269242 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269242 Gene

Publications for ENSG00000269242 Gene

  1. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J … Lucas SM (Nature 2004) 13

No data available for Mastermind for ENSG00000269242 Gene

Products for ENSG00000269242 Gene

Sources for ENSG00000269242 Gene