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Aliases for ENSG00000269139 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000269139 Gene

  • Novel Transcript, Antisense To CTXN1 And TIMM44 5
  • AC010336.5 5

External Ids for ENSG00000269139 Gene

Previous GeneCards Identifiers for ENSG00000269139 Gene

  • GC19P007990

Summaries for ENSG00000269139 Gene

GeneCards Summary for ENSG00000269139 Gene

ENSG00000269139 is an RNA Gene.

Additional gene information for ENSG00000269139 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000269139 Gene

Genomics for ENSG00000269139 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269139 Gene

Promoters and enhancers for ENSG00000269139 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J007924 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 613.5 +1.8 1839 6.5 ELF3 CTCF ZKSCAN8 MNT ZNF148 ZNF687 AHR TFE3 SP7 KLF14 ENSG00000269139 CTXN1 TIMM44 ENSG00000267939
GH19J008000 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.6 +77.7 77715 6.6 CC2D1A SP1 ZFX CTCF MNT NKRF POLR2A MLLT1 ZNF121 ZNF384 ELAVL1 ZNF557 XAB2 HNRNPM ZNF558 ENSG00000269139 MAP2K7 ZNF414 ENSG00000267939 CCL25
GH19J007902 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5.5 -22.0 -22000 3.2 SP1 ZFX CTCF ELF3 MNT ZNF148 NKRF POLR2A CEBPG GTF2F1 MAP2K7 ENSG00000214248 GC19M007901 GC19M007902 ZNF558 HNRNPM ELAVL1 XAB2 ZNF414 ENSG00000269300
GH19J008032 Enhancer 1.2 Ensembl ENCODE 9.1 +109.0 109044 5.7 ZFX ZNF652 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 BACH1 NCOA6 HNRNPM XAB2 ZNF557 ELAVL1 ZNF558 MAP2K7 TIMM44 ENSG00000269139 CCL25 ENSG00000267939
GH19J007982 Enhancer 0.9 Ensembl ENCODE dbSUPER 11.4 +57.1 57081 1.9 ZIC2 POLR2A PRDM4 HNF4A ZNF664 ZKSCAN1 PIR52412 TIMM44 ENSG00000269139 GC19P007992 ELAVL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269139 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269139 Gene

Genomic Locations for ENSG00000269139 Gene
chr19:7,926,001-7,926,810
(GRCh38/hg38)
Size:
810 bases
Orientation:
Plus strand
chr19:7,990,886-7,991,648
(GRCh37/hg19)
Size:
763 bases
Orientation:
Plus strand

Genomic View for ENSG00000269139 Gene

Genes around ENSG00000269139 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269139 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269139 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269139 Gene

Proteins for ENSG00000269139 Gene

Post-translational modifications for ENSG00000269139 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269139 Gene

Domains & Families for ENSG00000269139 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000269139 Gene

Function for ENSG00000269139 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269139 Gene

Localization for ENSG00000269139 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269139 Gene

Pathways & Interactions for ENSG00000269139 Gene

PathCards logo

SuperPathways for ENSG00000269139 Gene

No Data Available

Interacting Proteins for ENSG00000269139 Gene

Gene Ontology (GO) - Biological Process for ENSG00000269139 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269139 Gene

Drugs & Compounds for ENSG00000269139 Gene

No Compound Related Data Available

Transcripts for ENSG00000269139 Gene

mRNA/cDNA for ENSG00000269139 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269139 Gene

No ASD Table

Relevant External Links for ENSG00000269139 Gene

GeneLoc Exon Structure for
ENSG00000269139

Expression for ENSG00000269139 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269139 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000269139 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x6.9), Brain - Nucleus accumbens (basal ganglia) (x6.3), and Brain - Caudate (basal ganglia) (x5.8).
genes like me logo Genes that share expression patterns with ENSG00000269139: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269139 Gene

Orthologs for ENSG00000269139 Gene

Evolution for ENSG00000269139 Gene

ENSEMBL:
Gene Tree for ENSG00000269139 (if available)
TreeFam:
Gene Tree for ENSG00000269139 (if available)

No data available for Orthologs for ENSG00000269139 Gene

Paralogs for ENSG00000269139 Gene

No data available for Paralogs for ENSG00000269139 Gene

Variants for ENSG00000269139 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269139 Gene

Disorders for ENSG00000269139 Gene

No disorders were found for ENSG00000269139 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269139 Gene

Publications for ENSG00000269139 Gene

No publications were found for ENSG00000269139 Gene.

No data available for External Links for ENSG00000269139 Gene

Products for ENSG00000269139 Gene

Sources for ENSG00000269139 Gene

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