Aliases for ENSG00000269124 Gene

Subcategory (RNA class) for ENSG00000269124 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000269124 Gene

  • Novel Transcript, Antisense To HIF3A 5
  • NONHSAG026078 94
  • Lnc-CCDC8-4 170
  • AC007193.2 5

External Ids for ENSG00000269124 Gene

Previous GeneCards Identifiers for ENSG00000269124 Gene

  • GC19M046823

Summaries for ENSG00000269124 Gene

GeneCards Summary for ENSG00000269124 Gene

ENSG00000269124 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000269124 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000269124 Gene

Genomics for ENSG00000269124 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000269124 Gene

Promoters and enhancers for ENSG00000269124 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046340 Enhancer 0.3 Ensembl 750.6 -0.5 -497 0.6 ZNF513 ENSG00000269124 lnc-CCDC8-6 HIF3A
GH19J047225 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 20.5 -889.3 -889344 8.3 PPP1R10 GTF3C2 ZNF785 SIN3A ZNF24 SP1 ZBTB40 CTCF ZBTB6 MLX BBC3 lnc-ZC3H4-1 ZC3H4 BICRA ENSG00000268810 NOP53-AS1 CCDC9 NOP53 SLC1A5 PRKD2
GH19J046859 Promoter/Enhancer 2.2 EPDnew FANTOM5 ENCODE CraniofacialAtlas dbSUPER 12.5 -522.0 -522005 5.3 ZNF785 SIN3A ZNF24 ZBTB40 SP1 ZBTB6 MLX SMARCE1 POLR2A TCF7L2 ARHGAP35 AP2S1 HSALNG0126726 piR-34765 ZC3H4 ENSG00000268810 BICRA SYMPK CCDC61 CCDC9
GH19J046771 Enhancer 1.1 Ensembl ENCODE 20.5 -431.1 -431097 0.6 GATA3 LCORL FOXA1 TCF7L2 NR2F6 ZNF217 CREB1 MIXL1 ZNF362 ZNF121 STRN4 ENSG00000269124 FKRP IRF2BP1 PRKD2 PPP5C RF00017-3024 RF00017-3025 SLC1A5
GH19J046295 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 8.8 +39.5 39477 9.4 MLX RBPJ POLR2A ZNF133 NFYC ZNF121 NFIB SP1 ZNF148 ELF3 HIF3A PPP5C ENSG00000268810 IRF2BP1 ZC3H4 SYMPK ENSG00000269124 FOSB IGFL3 MYPOP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000269124 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000269124 Gene

Genomic Locations for ENSG00000269124 Gene
chr19:46,320,197-46,340,004
(GRCh38/hg38)
Size:
19,808 bases
Orientation:
Minus strand
chr19:46,823,454-46,843,261
(GRCh37/hg19)
Size:
19,808 bases
Orientation:
Minus strand

Genomic View for ENSG00000269124 Gene

Genes around ENSG00000269124 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000269124 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000269124 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000269124 Gene

Proteins for ENSG00000269124 Gene

Post-translational modifications for ENSG00000269124 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000269124 Gene

Domains & Families for ENSG00000269124 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000269124 Gene

Function for ENSG00000269124 Gene

Phenotypes From GWAS Catalog for ENSG00000269124 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000269124 Gene

Localization for ENSG00000269124 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000269124 Gene

Pathways & Interactions for ENSG00000269124 Gene

PathCards logo

SuperPathways for ENSG00000269124 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000269124 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000269124 Gene

Drugs & Compounds for ENSG00000269124 Gene

No Compound Related Data Available

Transcripts for ENSG00000269124 Gene

mRNA/cDNA for ENSG00000269124 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000269124 Gene

No ASD Table

Relevant External Links for ENSG00000269124 Gene

GeneLoc Exon Structure for
ENSG00000269124

Expression for ENSG00000269124 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000269124 Gene

genes like me logo Genes that share expression patterns with ENSG00000269124: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000269124 Gene

Orthologs for ENSG00000269124 Gene

Evolution for ENSG00000269124 Gene

ENSEMBL:
Gene Tree for ENSG00000269124 (if available)
TreeFam:
Gene Tree for ENSG00000269124 (if available)

No data available for Orthologs for ENSG00000269124 Gene

Paralogs for ENSG00000269124 Gene

No data available for Paralogs for ENSG00000269124 Gene

Variants for ENSG00000269124 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000269124 Gene

Disorders for ENSG00000269124 Gene

No disorders were found for ENSG00000269124 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000269124 Gene

Publications for ENSG00000269124 Gene

No publications were found for ENSG00000269124 Gene.

No data available for External Links for ENSG00000269124 Gene

Products for ENSG00000269124 Gene

Sources for ENSG00000269124 Gene