Aliases for ENSG00000268938 Gene

Subcategory (RNA class) for ENSG00000268938 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000268938 Gene

  • Novel Transcript, Antisense To FKBP8 5
  • NONHSAG025135.2 91
  • HSALNG0124637 164
  • AC005387.1 5
  • Lnc-KXD1-3 165

External Ids for ENSG00000268938 Gene

Previous GeneCards Identifiers for ENSG00000268938 Gene

  • GC19P018642
  • GC19P018533
  • GC19P020500
  • GC19P020642
  • GC19P020746
  • GC19P022253
  • GC19P018535
  • GC19P018714
  • GC19P018726
  • GC19P019033
  • GC19P019350
  • GC19P019681
  • GC19P020048
  • GC19P020361

Summaries for ENSG00000268938 Gene

GeneCards Summary for ENSG00000268938 Gene

ENSG00000268938 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000268938 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000268938 Gene

Genomics for ENSG00000268938 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000268938 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J018587 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 65.2 +58.0 58008 3.7 HNRNPL GATAD2A CTCF PRDM10 ZNF629 TFE3 ZNF512 IKZF1 ZNF692 POLR2A REX1BD piR-57461-107 ENSG00000268030 UPF1 MAU2 ENSG00000268938 NR2C2AP IQCN ENSG00000269191 MEF2B
GH19J017859 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 62.5 -668.7 -668672 7.5 SP1 CREB1 CTCF HNRNPL PRDM10 ZNF629 TFE3 SIX5 ZNF692 POLR2A RPL18A MN297184-002 NONHSAG025111.2 SNORA68 piR-33407-002 piR-38446-002 ENSG00000268030 UPF1 ENSG00000268938 IQCN
GH19J018414 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 38.9 -112.8 -112783 9.3 RNF2 HNRNPL GATAD2A PRDM10 ZNF629 TFE3 RFX1 LEF1 IKZF1 NFKBIZ SSBP4 NONHSAG025131.2 MAU2 NR2C2AP ENSG00000268030 UPF1 IQCN ENSG00000268938 ENSG00000269191 COLGALT1
GH19J018372 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 34.5 -150.2 -150156 18.3 SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 PRDM10 ZNF629 REST TFE3 GDF15 NR2C2AP ENSG00000268030 IQCN UPF1 MAU2 ENSG00000268938 SUGP2 ENSG00000269191 COLGALT1
GH19J018289 Promoter/Enhancer 2.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 36.5 -239.1 -239134 6.2 SP1 CREB1 HNRNPL TEAD4 YBX1 PRDM10 ZNF629 TFE3 RFX1 LEF1 NR2C2AP ENSG00000268030 IQCN SUGP2 UPF1 COLGALT1 ENSG00000268938 LOC100507551 MVB12A MEF2B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268938 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000268938 Gene

Genomic Locations for ENSG00000268938 Gene
chr19:18,531,418-18,532,632
(GRCh38/hg38)
Size:
1,215 bases
Orientation:
Plus strand
chr19:18,642,423-18,643,442
(GRCh37/hg19)
Size:
1,020 bases
Orientation:
Plus strand

Genomic View for ENSG00000268938 Gene

Genes around ENSG00000268938 on UCSC Golden Path with GeneCards custom track
ENSG00000268938 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000268938 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268938 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268938 Gene

Proteins for ENSG00000268938 Gene

Post-translational modifications for ENSG00000268938 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000268938 Gene

Domains & Families for ENSG00000268938 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000268938 Gene

Function for ENSG00000268938 Gene

Phenotypes From GWAS Catalog for ENSG00000268938 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268938 Gene

Localization for ENSG00000268938 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268938 Gene

Pathways & Interactions for ENSG00000268938 Gene

PathCards logo

SuperPathways for ENSG00000268938 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000268938 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000268938 Gene

Drugs & Compounds for ENSG00000268938 Gene

No Compound Related Data Available

Transcripts for ENSG00000268938 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000268938 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004EE086_9606 lncRNA 352 3

Ensembl: ENST00000597837 (view in UCSC) ,

LncBook: HSALNT0256809,

LNCipedia: lnc-KXD1-3:2,

URS00008BE60D_9606 lncRNA 421 3

LncBook: HSALNT0256808,

LNCipedia: lnc-KXD1-3:1,

NONCODE: NONHSAT062976.2,

ENSG00000268938 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268938 Gene

No ASD Table

Relevant External Links for ENSG00000268938 Gene

GeneLoc Exon Structure for
ENSG00000268938

No data available for mRNA/cDNA for ENSG00000268938 Gene

Expression for ENSG00000268938 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000268938 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000268938 Gene

This gene is overexpressed in Whole Blood (x6.5).
genes like me logo Genes that share expression patterns with ENSG00000268938: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268938 Gene

Orthologs for ENSG00000268938 Gene

Evolution for ENSG00000268938 Gene

ENSEMBL:
Gene Tree for ENSG00000268938 (if available)
TreeFam:
Gene Tree for ENSG00000268938 (if available)

No data available for Orthologs for ENSG00000268938 Gene

Paralogs for ENSG00000268938 Gene

No data available for Paralogs for ENSG00000268938 Gene

Variants for ENSG00000268938 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268938 Gene

Disorders for ENSG00000268938 Gene

Additional Disease Information for ENSG00000268938

No disorders were found for ENSG00000268938 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000268938 Gene

Publications for ENSG00000268938 Gene

No publications were found for ENSG00000268938 Gene.

No data available for Mastermind for ENSG00000268938 Gene

Products for ENSG00000268938 Gene

Sources for ENSG00000268938 Gene