Aliases for ENSG00000268743 Gene

Subcategory (RNA class) for ENSG00000268743 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000268743 Gene

  • Novel Transcript, Sense Intronic SIN3B 5
  • NONHSAG025059.2 91
  • AC008737.1 5
  • Lnc-NWD1-2 165

External Ids for ENSG00000268743 Gene

Previous GeneCards Identifiers for ENSG00000268743 Gene

  • GC19P017380
  • GC19P017931
  • GC19P016875
  • GC19P016975
  • GC19P020456
  • GC19P020596
  • GC19P020708
  • GC19P022219
  • GC19P017609
  • GC19P018275
  • GC19P018677
  • GC19P018981
  • GC19P019306
  • GC19P019641
  • GC19P019996
  • GC19P020314

Summaries for ENSG00000268743 Gene

GeneCards Summary for ENSG00000268743 Gene

ENSG00000268743 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000268743 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000268743 Gene

Genomics for ENSG00000268743 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000268743 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J017333 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 119.7 +492.1 492068 6.2 ZNF221 SP1 HNRNPL CREB1 GATAD2A TEAD4 PRDM10 ZNF629 ZNF512 SIX5 GTPBP3 ANO8 HSALNG0124507 lnc-DDA1-1 CHERP ENSG00000269578 ENSG00000268743 IQCN C19orf44 SIN3B
GH19J017106 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 72.4 +265.2 265165 4.4 SP1 HNRNPL ZBTB33 PRDM10 ZNF629 ZNF692 POLR2A RELA ZIC2 PATZ1 CHERP ENSG00000269578 ENSG00000268743 ENSG00000267904 C19orf44 ENSG00000268087 GTPBP3 SIN3B MYO9B SMIM7
GH19J016658 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 41.7 -183.4 -183424 4 SP1 CREB1 GATAD2A ZNF629 PRDM10 TFE3 LEF1 KDM1A CTCF ZNF692 TMEM38A SMIM7 ENSG00000268790 lnc-MED26-4 CHERP ENSG00000268743 ENSG00000269578 C19orf44 COLGALT1 ENSG00000268087
GH19J016885 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 36.2 +44.3 44258 5.4 SP1 HNRNPL ATF7 TFE3 LEF1 IKZF1 POLR2A JUND LARP7 DDX20 F2RL3 CHERP C19orf44 ENSG00000268743 SIN3B ENSG00000269578 LOC100507551 ENSG00000267904 GTPBP3 ENSG00000268087
GH19J016110 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 28 -727.9 -727890 11.1 RNF2 SP1 HNRNPL CREB1 GATAD2A CTCF ZBTB33 PRDM10 RFX1 IKZF1 RAB8A CHERP AKAP8 ENSG00000268743 ENSG00000269578 ENSG00000267904 ENSG00000268087 BRD4 C19orf44 SMIM7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268743 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000268743 Gene

Genomic Locations for ENSG00000268743 Gene
chr19:16,844,025-16,846,473
(GRCh38/hg38)
Size:
2,449 bases
Orientation:
Plus strand
chr19:16,954,836-16,957,284
(GRCh37/hg19)
Size:
2,449 bases
Orientation:
Plus strand

Genomic View for ENSG00000268743 Gene

Genes around ENSG00000268743 on UCSC Golden Path with GeneCards custom track
ENSG00000268743 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000268743 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268743 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268743 Gene

Proteins for ENSG00000268743 Gene

Post-translational modifications for ENSG00000268743 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000268743 Gene

Domains & Families for ENSG00000268743 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000268743 Gene

Function for ENSG00000268743 Gene

Phenotypes From GWAS Catalog for ENSG00000268743 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268743 Gene

Localization for ENSG00000268743 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268743 Gene

Pathways & Interactions for ENSG00000268743 Gene

PathCards logo

SuperPathways for ENSG00000268743 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000268743 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000268743 Gene

Drugs & Compounds for ENSG00000268743 Gene

No Compound Related Data Available

Transcripts for ENSG00000268743 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000268743 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003CDAD7_9606 lncRNA 371 3

Ensembl: ENST00000600987 (view in UCSC) ,

LNCipedia: lnc-NWD1-2:1,

NONCODE: NONHSAT062821.2,

ENSG00000268743 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268743 Gene

No ASD Table

Relevant External Links for ENSG00000268743 Gene

GeneLoc Exon Structure for
ENSG00000268743

No data available for mRNA/cDNA for ENSG00000268743 Gene

Expression for ENSG00000268743 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000268743 Gene

genes like me logo Genes that share expression patterns with ENSG00000268743: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268743 Gene

Orthologs for ENSG00000268743 Gene

Evolution for ENSG00000268743 Gene

ENSEMBL:
Gene Tree for ENSG00000268743 (if available)
TreeFam:
Gene Tree for ENSG00000268743 (if available)

No data available for Orthologs for ENSG00000268743 Gene

Paralogs for ENSG00000268743 Gene

No data available for Paralogs for ENSG00000268743 Gene

Variants for ENSG00000268743 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268743 Gene

Disorders for ENSG00000268743 Gene

Additional Disease Information for ENSG00000268743

No disorders were found for ENSG00000268743 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000268743 Gene

Publications for ENSG00000268743 Gene

No publications were found for ENSG00000268743 Gene.

No data available for Mastermind for ENSG00000268743 Gene

Products for ENSG00000268743 Gene

Sources for ENSG00000268743 Gene