Aliases for ENSG00000268603 Gene

Data sources for ENSG00000268603 Gene:

RNA type for ENSG00000268603 Gene

lncRNA

Aliases for ENSG00000268603 Gene

External Ids for ENSG00000268603 Gene

Previous GeneCards Identifiers for ENSG00000268603 Gene

  • GC02M220362

Summaries for ENSG00000268603 Gene

GeneCards Summary for ENSG00000268603 Gene

ENSG00000268603 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000268603 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000268603 Gene

Genomics for ENSG00000268603 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000268603 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J219495 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 258.1 +1.0 966 5.5 IKZF1 MYC SIX5 ZNF580 ZNF592 ZMYM3 KLF9 POLR2A BRCA1 NFIC GMPPA ENSG00000268603 HSALNG0022385 SPEGNB CNOT9 NHEJ1 USP37 ZNF142 STK36 RNF25
GH02J219368 Enhancer 0.9 ENCODE 11.4 +129.4 129427 2.4 ZNF600 IKZF1 ZNF580 ATF2 CEBPA ATF3 ZBTB10 CEBPB FEZF1 ZNF639 LOC105373883 lnc-DNPEP-4 ZNF142 RNF25 STK36 CNOT9 ENSG00000269068 STK11IP ENSG00000268896 ANKZF1
GH02J219475 Promoter/Enhancer 1.4 ENCODE CraniofacialAtlas dbSUPER 6.3 +22.3 22292 1.9 ZNF654 IKZF1 POLR2A ZIC2 CTCF REST ZEB1 SIN3A RAD21 SMC3 ENSG00000268603 ASIC4 HSALNG0022382 ENSG00000286143 lnc-DES-2 SPEG
GH02J219500 Enhancer 0.8 Ensembl ENCODE 5.7 -3.1 -3148 2.2 NCOR1 IKZF1 ZNF592 ZNF316 ZFP91 STAT5A HDAC2 MAFK MAFF ZMYM3 ENSG00000268603 GMPPA NONHSAG030590.2 ASIC4 ASIC4-AS1
GH02J219492 Enhancer 0.6 Ensembl ENCODE 6.3 +6.1 6073 0.5 RAD21 EGR1 CTCF ZNF143 ENSG00000286143 ENSG00000268603 SPEGNB ASIC4-AS1 SPEG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268603 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000268603 Gene

Latest Assembly
chr2:219,488,982-219,498,733
(GRCh38/hg38)
Size:
9,752 bases
Orientation:
Minus strand

Previous Assembly
chr2:220,362,333-220,362,968
(GRCh37/hg19 by Ensembl)
Size:
636 bases
Orientation:
Minus strand

Genomic View for ENSG00000268603 Gene

Genes around ENSG00000268603 on UCSC Golden Path with GeneCards custom track
ENSG00000268603 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000268603 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268603 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268603 Gene

Proteins for ENSG00000268603 Gene

Post-translational modifications for ENSG00000268603 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000268603 Gene

Domains & Families for ENSG00000268603 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000268603 Gene

Function for ENSG00000268603 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268603 Gene

Localization for ENSG00000268603 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268603 Gene

Pathways & Interactions for ENSG00000268603 Gene

PathCards logo

SuperPathways for ENSG00000268603 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000268603 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000268603 Gene

Drugs & Compounds for ENSG00000268603 Gene

No Compound Related Data Available

Transcripts for ENSG00000268603 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000268603 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000605E46_9606 lncRNA 636 2

Ensembl: ENST00000601508 (view in UCSC) ,

LNCipedia: lnc-CHPF-4:3,

URS00008B816E_9606 lncRNA 5070 2

LNCipedia: lnc-CHPF-4:2,

NONCODE: NONHSAT077043.2,

URS00008B5289_9606 lncRNA 1370 2

LNCipedia: lnc-CHPF-4:1,

NONCODE: NONHSAT077044.2,

URS0000D591AE_9606 lncRNA 9722 1

LNCipedia: lnc-CHPF-4:4,

URS0000D59F37_9606 lncRNA 1653 1

LNCipedia: lnc-CHPF-4:5,

ENSG00000268603 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268603 Gene

No ASD Table

Relevant External Links for ENSG00000268603 Gene

GeneLoc Exon Structure for
ENSG00000268603

No data available for mRNA/cDNA for ENSG00000268603 Gene

Expression for ENSG00000268603 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000268603 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000268603 Gene

This gene is overexpressed in Muscle - Skeletal (x6.4).
genes like me logo Genes that share expression patterns with ENSG00000268603: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268603 Gene

Orthologs for ENSG00000268603 Gene

Evolution for ENSG00000268603 Gene

ENSEMBL:
Gene Tree for ENSG00000268603 (if available)
TreeFam:
Gene Tree for ENSG00000268603 (if available)

No data available for Orthologs for ENSG00000268603 Gene

Paralogs for ENSG00000268603 Gene

No data available for Paralogs for ENSG00000268603 Gene

Variants for ENSG00000268603 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268603 Gene

Disorders for ENSG00000268603 Gene

No disorders were found for ENSG00000268603 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000268603 Gene

Publications for ENSG00000268603 Gene

No publications were found for ENSG00000268603 Gene.

No data available for Mastermind for ENSG00000268603 Gene

Products for ENSG00000268603 Gene

Sources for ENSG00000268603 Gene