Aliases for ENSG00000268564 Gene

Subcategory (RNA class) for ENSG00000268564 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000268564 Gene

  • Novel Transcript, Antisense To ILVBL 5
  • NONHSAG024981 94
  • HSALNG0124356 169
  • Lnc-SYDE1-1 170
  • AC003956.1 5

External Ids for ENSG00000268564 Gene

Previous GeneCards Identifiers for ENSG00000268564 Gene

  • GC19P015234

Summaries for ENSG00000268564 Gene

GeneCards Summary for ENSG00000268564 Gene

ENSG00000268564 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000268564 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000268564 Gene

Genomics for ENSG00000268564 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000268564 Gene

Promoters and enhancers for ENSG00000268564 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J015123 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +1.1 1092 3.7 ZNF785 SIN3A ZBTB40 SP1 SREBF1 ZBTB6 LCORL MLX RBPJ SMARCE1 ILVBL ENSG00000268564 lnc-NOTCH3-1 AKAP8 ZNF333 BRD4 ADGRL1 ASF1B OR10H2 OR1AB1P
GH19J015106 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -16.1 -16107 3.5 POLR2A CREB1 ZNF652 ZNF384 GLIS2 PKNOX1 ZIC2 ZBTB8A PRDM10 PATZ1 SYDE1 MG828564 RNU6-782P ENSG00000268564 lnc-OR7C2-1
GH19J015115 Enhancer 0.7 Ensembl ENCODE 0.4 -10.1 -10077 0.6 ZBTB40 POLR2A L3MBTL2 SP2 SCRT2 MGA USF1 GABPA ZBTB33 SYDE1 ENSG00000268564 lnc-OR7C2-1
GH19J015113 Enhancer 0.6 ENCODE 0.4 -10.7 -10695 0.2 ZBTB40 NFYC HLF SP1 CEBPG CEBPA PKNOX1 CEBPB MGA RFX1 SYDE1 ENSG00000268564 lnc-OR7C2-1
GH19J015116 Enhancer 0.5 Ensembl ENCODE 0.4 -8.4 -8360 2.2 POLR2A NR2F2 RNU6-782P SYDE1 ENSG00000268564 ILVBL lnc-OR7C2-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268564 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000268564 Gene

Genomic Locations for ENSG00000268564 Gene
chr19:15,124,160-15,126,174
(GRCh38/hg38)
Size:
2,015 bases
Orientation:
Plus strand
chr19:15,234,971-15,236,985
(GRCh37/hg19)
Size:
2,015 bases
Orientation:
Plus strand

Genomic View for ENSG00000268564 Gene

Genes around ENSG00000268564 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000268564 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268564 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268564 Gene

Proteins for ENSG00000268564 Gene

Post-translational modifications for ENSG00000268564 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000268564 Gene

Domains & Families for ENSG00000268564 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000268564 Gene

Function for ENSG00000268564 Gene

Phenotypes From GWAS Catalog for ENSG00000268564 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268564 Gene

Localization for ENSG00000268564 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268564 Gene

Pathways & Interactions for ENSG00000268564 Gene

PathCards logo

SuperPathways for ENSG00000268564 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000268564 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000268564 Gene

Drugs & Compounds for ENSG00000268564 Gene

No Compound Related Data Available

Transcripts for ENSG00000268564 Gene

mRNA/cDNA for ENSG00000268564 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268564 Gene

No ASD Table

Relevant External Links for ENSG00000268564 Gene

GeneLoc Exon Structure for
ENSG00000268564

Expression for ENSG00000268564 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000268564 Gene

genes like me logo Genes that share expression patterns with ENSG00000268564: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268564 Gene

Orthologs for ENSG00000268564 Gene

Evolution for ENSG00000268564 Gene

ENSEMBL:
Gene Tree for ENSG00000268564 (if available)
TreeFam:
Gene Tree for ENSG00000268564 (if available)

No data available for Orthologs for ENSG00000268564 Gene

Paralogs for ENSG00000268564 Gene

No data available for Paralogs for ENSG00000268564 Gene

Variants for ENSG00000268564 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268564 Gene

Disorders for ENSG00000268564 Gene

No disorders were found for ENSG00000268564 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000268564 Gene

Publications for ENSG00000268564 Gene

No publications were found for ENSG00000268564 Gene.

No data available for External Links for ENSG00000268564 Gene

Products for ENSG00000268564 Gene

Sources for ENSG00000268564 Gene