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Aliases for ENSG00000268500 Gene

Aliases for ENSG00000268500 Gene

  • Novel Transcript, Sense Intronic To AC018755.18 5
  • AC018755.2 5

External Ids for ENSG00000268500 Gene

Previous GeneCards Identifiers for ENSG00000268500 Gene

  • GC19M052116

Summaries for ENSG00000268500 Gene

GeneCards Summary for ENSG00000268500 Gene

ENSG00000268500 is a Protein Coding gene. An important paralog of this gene is SIGLEC5.

Additional gene information for ENSG00000268500 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000268500 Gene

Genomics for ENSG00000268500 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000268500 Gene

Promoters and enhancers for ENSG00000268500 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J051644 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 600.7 +1.1 1070 3.2 IKZF1 BCOR ZMYM3 KDM1A SIGLEC14 ENSG00000268500 SIGLEC5 IGLON5
GH19J051621 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +26.1 26088 2.8 CREM IKZF1 IKZF2 CBFB DPF2 EED RUNX3 BCLAF1 BCL11A JUNB RPL9P33 FPR2 FPR1 SIGLEC14 SIGLEC10 ZNF350 SIGLEC5 PIR37863 ENSG00000268500
GH19J051643 Promoter 0.5 EPDnew 0.7 +3.8 3847 0.1 SIGLEC14 ENSG00000273837 ENSG00000268500 SIGLEC5
GH19J051628 Promoter/Enhancer 0.7 EPDnew dbSUPER 0.4 +18.9 18857 0.1 RPL9P33 ENSG00000273837 SIGLEC5 ENSG00000268500
GH19J051632 Enhancer 0.6 ENCODE 0.4 +14.6 14586 0.2 CTBP1 DPF2 CUX1 GATAD2B GATA3 JUND ZNF217 ZNF169 SMARCE1 ZNF175 ENSG00000260160 ENSG00000273837 ENSG00000268500 RPL9P33 SIGLEC5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268500 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000268500 Gene

Genomic Locations for ENSG00000268500 Gene
chr19:51,612,091-51,646,889
(GRCh38/hg38)
Size:
34,799 bases
Orientation:
Minus strand
chr19:52,115,344-52,150,142
(GRCh37/hg19)
Size:
34,799 bases
Orientation:
Minus strand

Genomic View for ENSG00000268500 Gene

Genes around ENSG00000268500 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000268500 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268500 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268500 Gene

Proteins for ENSG00000268500 Gene

Post-translational modifications for ENSG00000268500 Gene

No Post-translational modifications

Other Protein References for ENSG00000268500 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000268500 Gene

Domains & Families for ENSG00000268500 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000268500 Gene

Function for ENSG00000268500 Gene

Phenotypes From GWAS Catalog for ENSG00000268500 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268500 Gene

Localization for ENSG00000268500 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268500 Gene

Pathways & Interactions for ENSG00000268500 Gene

PathCards logo

SuperPathways for ENSG00000268500 Gene

No Data Available

Interacting Proteins for ENSG00000268500 Gene

STRING Interaction Network Preview (showing top 5 STRING interactants - click image to see top 25)
https://version11.string-db.org/api/image/network?species=9606&limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000470259%0d9606.ENSP00000455510%0d9606.ENSP00000291707%0d9606.ENSP00000321077%0d9606.ENSP00000323328%0d9606.ENSP00000413861%0d
Selected Interacting proteins: ENSP00000470259 for ENSG00000268500 Gene via STRING

Gene Ontology (GO) - Biological Process for ENSG00000268500 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000268500 Gene

Drugs & Compounds for ENSG00000268500 Gene

No Compound Related Data Available

Transcripts for ENSG00000268500 Gene

mRNA/cDNA for ENSG00000268500 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268500 Gene

No ASD Table

Relevant External Links for ENSG00000268500 Gene

GeneLoc Exon Structure for
ENSG00000268500

Expression for ENSG00000268500 Gene

Evidence on tissue expression from TISSUES for ENSG00000268500 Gene

  • Nervous system(4)
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268500 Gene

Orthologs for ENSG00000268500 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000268500 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 95 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 63 (a)
ManyToMany
-- 35
  • 57 (a)
ManyToMany
-- 35
  • 55 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 62 (a)
ManyToMany
-- 35
  • 57 (a)
ManyToMany
Species where no ortholog for ENSG00000268500 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000268500 Gene

ENSEMBL:
Gene Tree for ENSG00000268500 (if available)
TreeFam:
Gene Tree for ENSG00000268500 (if available)

Paralogs for ENSG00000268500 Gene

Pseudogenes.org Pseudogenes for ENSG00000268500 Gene

genes like me logo Genes that share paralogs with ENSG00000268500: view

Variants for ENSG00000268500 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268500 Gene

Disorders for ENSG00000268500 Gene

No disorders were found for ENSG00000268500 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000268500 Gene

Publications for ENSG00000268500 Gene

No publications were found for ENSG00000268500 Gene.

No data available for External Links for ENSG00000268500 Gene

Products for ENSG00000268500 Gene

Sources for ENSG00000268500 Gene

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