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Aliases for ENSG00000268496 Gene

Subcategory (RNA class) for ENSG00000268496 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000268496 Gene

  • Novel Transcript, Sense Intronic To TTYH1 5
  • AC245884.9 5

External Ids for ENSG00000268496 Gene

ORGUL Members for ENSG00000268496 Gene

Previous GeneCards Identifiers for ENSG00000268496 Gene

  • GC19P054945

Summaries for ENSG00000268496 Gene

GeneCards Summary for ENSG00000268496 Gene

ENSG00000268496 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000268496 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000268496 Gene

Genomics for ENSG00000268496 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000268496 Gene

Promoters and enhancers for ENSG00000268496 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J054433 Enhancer 0.6 dbSUPER 600.7 +0.2 241 1.2 POLR2A NFIB CREB1 ZBTB33 SUPT5H ZSCAN16 ZNF687 PAF1 MNT ENSG00000227407 ENSG00000268496 ENSG00000267838 TTYH1
GH19J054429 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.7 -2.8 -2767 2 GLIS2 ZNF600 PRDM10 ZIC2 PATZ1 CTBP1 POLR2A ZNF341 KLF9 SP2 ENSG00000267838 ENSG00000227407 ENSG00000268496 TTYH1
GH19J054417 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 -14.1 -14131 4.5 SP1 ELF3 ZNF687 AHR SP5 PRDM1 KAT8 HMG20B RFX1 SOX13 LENG8 LENG8-AS1 TSEN34 TTYH1 ENSG00000268496
GH19J054415 Promoter/Enhancer 1.5 EPDnew Ensembl dbSUPER 0.4 -18.2 -18182 1.6 POLR2A SCRT2 CTCF ZNF143 HLF TTYH1 LENG8 LENG8-AS1 ENSG00000268496
GH19J054426 Enhancer 0.6 FANTOM5 dbSUPER 0.4 -8.6 -8627 0.3 MAFK ZNF316 EMSY ENSG00000268496 TTYH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268496 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000268496 Gene

Genomic Locations for ENSG00000268496 Gene
chr19:54,434,183-54,434,665
(GRCh38/hg38)
Size:
483 bases
Orientation:
Plus strand
chr19:54,945,363-54,945,845
(GRCh37/hg19)
Size:
483 bases
Orientation:
Plus strand

Genomic View for ENSG00000268496 Gene

Genes around ENSG00000268496 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000268496 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268496 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268496 Gene

Proteins for ENSG00000268496 Gene

Post-translational modifications for ENSG00000268496 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000268496 Gene

Domains & Families for ENSG00000268496 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000268496 Gene

Function for ENSG00000268496 Gene

Phenotypes From GWAS Catalog for ENSG00000268496 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268496 Gene

Localization for ENSG00000268496 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268496 Gene

Pathways & Interactions for ENSG00000268496 Gene

PathCards logo

SuperPathways for ENSG00000268496 Gene

No Data Available

Interacting Proteins for ENSG00000268496 Gene

Gene Ontology (GO) - Biological Process for ENSG00000268496 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000268496 Gene

Drugs & Compounds for ENSG00000268496 Gene

No Compound Related Data Available

Transcripts for ENSG00000268496 Gene

mRNA/cDNA for ENSG00000268496 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268496 Gene

No ASD Table

Relevant External Links for ENSG00000268496 Gene

GeneLoc Exon Structure for
ENSG00000268496

Expression for ENSG00000268496 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268496 Gene

Orthologs for ENSG00000268496 Gene

Evolution for ENSG00000268496 Gene

ENSEMBL:
Gene Tree for ENSG00000268496 (if available)
TreeFam:
Gene Tree for ENSG00000268496 (if available)

No data available for Orthologs for ENSG00000268496 Gene

Paralogs for ENSG00000268496 Gene

No data available for Paralogs for ENSG00000268496 Gene

Variants for ENSG00000268496 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268496 Gene

Disorders for ENSG00000268496 Gene

No disorders were found for ENSG00000268496 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000268496 Gene

Publications for ENSG00000268496 Gene

No publications were found for ENSG00000268496 Gene.

No data available for External Links for ENSG00000268496 Gene

Products for ENSG00000268496 Gene

Sources for ENSG00000268496 Gene

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