Aliases for ENSG00000268199 Gene

Subcategory (RNA class) for ENSG00000268199 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000268199 Gene

  • Novel Transcript, Antisense To ELL 5
  • NONHSAG025133 94
  • HSALNG0124629 169
  • Lnc-SSBP4-2 170
  • AC010335.1 5

External Ids for ENSG00000268199 Gene

Previous GeneCards Identifiers for ENSG00000268199 Gene

  • GC19P018551
  • GC19P018661

Summaries for ENSG00000268199 Gene

GeneCards Summary for ENSG00000268199 Gene

ENSG00000268199 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000268199 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000268199 Gene

Genomics for ENSG00000268199 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000268199 Gene

Promoters and enhancers for ENSG00000268199 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J018436 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 762.8 -1.9 -1932 6.6 GTF3C2 ZNF785 CTCF RBPJ SMARCE1 CTBP1 ZNF701 L3MBTL2 HDGF MNT ENSG00000268199 ISYNA1 ENSG00000268030 UPF1 ENSG00000268938 NR2C2AP IQCN MEF2B COLGALT1 SSBP4
GH19J018372 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.4 -60.2 -60157 18.3 SIN3A ZNF24 ZBTB40 SP1 CTCF SREBF1 ZBTB6 LCORL MLX FOXA1 GDF15 ENSG00000268030 NR2C2AP UPF1 IQCN MAU2 COLGALT1 ENSG00000268938 MEF2B MVB12A
GH19J018414 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.5 -22.8 -22784 9.3 ZNF785 ZBTB40 CTCF ZBTB6 MLX SMARCE1 USF2 NR2F1 NR2F6 ZNF362 SSBP4 NONHSAG025131.2 ENSG00000268030 NR2C2AP UPF1 COLGALT1 MAU2 ENSG00000268938 IQCN RPL18A
GH19J018150 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12.2 -286.7 -286682 8.1 ZNF24 SP1 ZBTB40 CTCF FOXA1 SMARCE1 POLR2A USF2 NR2F6 ZNF362 ENSG00000268173 PIK3R2 piR-59059 ENSG00000268030 UPF1 ENSG00000268938 COLGALT1 IQCN PLVAP ENSG00000269191
GH19J019320 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.2 +879.4 879382 3.6 SP1 ZBTB40 SIX5 ZBTB6 RBPJ POLR2A CREB1 HCFC1 ZNF133 MYC MAU2 SUGP1 NONHSAG025175.2 lnc-TM6SF2-3 ENSG00000267481 NDUFA13 UPF1 ENSG00000268030 GATAD2A ZNF506
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000268199 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000268199 Gene

Genomic Locations for ENSG00000268199 Gene
chr19:18,441,419-18,443,597
(GRCh38/hg38)
Size:
2,179 bases
Orientation:
Plus strand
chr19:18,552,229-18,554,407
(GRCh37/hg19)
Size:
2,179 bases
Orientation:
Plus strand

Genomic View for ENSG00000268199 Gene

Genes around ENSG00000268199 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000268199 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000268199 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000268199 Gene

Proteins for ENSG00000268199 Gene

Post-translational modifications for ENSG00000268199 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000268199 Gene

Domains & Families for ENSG00000268199 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000268199 Gene

Function for ENSG00000268199 Gene

Phenotypes From GWAS Catalog for ENSG00000268199 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000268199 Gene

Localization for ENSG00000268199 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000268199 Gene

Pathways & Interactions for ENSG00000268199 Gene

PathCards logo

SuperPathways for ENSG00000268199 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000268199 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000268199 Gene

Drugs & Compounds for ENSG00000268199 Gene

No Compound Related Data Available

Transcripts for ENSG00000268199 Gene

mRNA/cDNA for ENSG00000268199 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LNCipedia transcripts :
(1) NONCODE transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000268199 Gene

No ASD Table

Relevant External Links for ENSG00000268199 Gene

GeneLoc Exon Structure for
ENSG00000268199

Expression for ENSG00000268199 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000268199 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000268199 Gene

This gene is overexpressed in Whole Blood (x5.2).
genes like me logo Genes that share expression patterns with ENSG00000268199: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000268199 Gene

Orthologs for ENSG00000268199 Gene

Evolution for ENSG00000268199 Gene

ENSEMBL:
Gene Tree for ENSG00000268199 (if available)
TreeFam:
Gene Tree for ENSG00000268199 (if available)

No data available for Orthologs for ENSG00000268199 Gene

Paralogs for ENSG00000268199 Gene

No data available for Paralogs for ENSG00000268199 Gene

Variants for ENSG00000268199 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000268199 Gene

Disorders for ENSG00000268199 Gene

No disorders were found for ENSG00000268199 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000268199 Gene

Publications for ENSG00000268199 Gene

No publications were found for ENSG00000268199 Gene.

No data available for External Links for ENSG00000268199 Gene

Products for ENSG00000268199 Gene

Sources for ENSG00000268199 Gene