Aliases for ENSG00000267879 Gene

Data sources for ENSG00000267879 Gene:

Subcategory (RNA class) for ENSG00000267879 Gene

lncRNA

Aliases for ENSG00000267879 Gene

External Ids for ENSG00000267879 Gene

Previous GeneCards Identifiers for ENSG00000267879 Gene

  • GC19P051471

Summaries for ENSG00000267879 Gene

GeneCards Summary for ENSG00000267879 Gene

ENSG00000267879 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267879 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267879 Gene

Genomics for ENSG00000267879 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267879 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J050968 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 +0.9 903 2 ZNF217 MBD2 GABPB1 CTBP1 SIN3A JUND SMARCE1 MAZ EGR1 DPF2 KLK6 ENSG00000267879 KLK7 KLK5 ENSG00000269495 ZNF473 LOC105372442
GH19J051016 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 5.4 +50.4 50430 4 ZBTB10 CEBPA IKZF1 ETS1 ZNF217 CTCF ZEB1 ELF1 ZIC2 REST KLK10 HSALNG0127163 HSALNG0127164 ZNF175 ZNF615 ZNF577 ZNF473 POLD1 SPACA6 ZNF613
GH19J050999 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.3 +33.3 33278 3.5 TBP MNT IKZF1 NBN TRIM25 ZNF341 ZBTB5 SKIL NKRF PRDM10 KLK8 HSALNG0127160 HSALNG0127161 lnc-KLK9-1 KLK7 KLK10 ENSG00000269741 KLK9 ENSG00000267879
GH19J050975 Enhancer 0.8 Ensembl ENCODE 0.4 +7.7 7711 1 ZNF217 ELF1 CTBP1 TCF7L2 JUND SMARCE1 MAZ DPF2 NCOA3 CREB1 HSALNG0127156 ENSG00000267879 KLK6 KLK7
GH19J050983 Promoter 0.8 EPDnew Ensembl 0.4 +15.9 15907 0.6 EGR1 EGR2 KLK7 lnc-KLK8-1 ENSG00000267879 lnc-KLK9-1 KLK8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267879 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267879 Gene

Latest Assembly
chr19:50,968,193-51,012,798
(GRCh38/hg38)
Size:
44,606 bases
Orientation:
Plus strand

Previous Assembly
chr19:51,471,466-51,515,385
(GRCh37/hg19 by Ensembl)
Size:
43,920 bases
Orientation:
Plus strand

Genomic View for ENSG00000267879 Gene

Genes around ENSG00000267879 on UCSC Golden Path with GeneCards custom track
ENSG00000267879 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267879 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267879 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267879 Gene

Proteins for ENSG00000267879 Gene

Post-translational modifications for ENSG00000267879 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267879 Gene

Domains & Families for ENSG00000267879 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267879 Gene

Function for ENSG00000267879 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267879 Gene

Localization for ENSG00000267879 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267879 Gene

Pathways & Interactions for ENSG00000267879 Gene

PathCards logo

SuperPathways for ENSG00000267879 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267879 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267879 Gene

Drugs & Compounds for ENSG00000267879 Gene

No Compound Related Data Available

Transcripts for ENSG00000267879 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267879 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003FE83F_9606 lncRNA 536 3

Ensembl: ENST00000594512 (view in UCSC) ,

LNCipedia: lnc-KLK2-5:1,

NONCODE: NONHSAT067401.2,

URS0000EF307B_9606 lncRNA 3027 1

Ensembl: ENST00000671133 (view in UCSC) ,

URS00009B004B_9606 lncRNA 570 2

LncBook: HSALNT0261632,

NONCODE: NONHSAT179903.1,

URS00009B1450_9606 lncRNA 366 2

LncBook: HSALNT0261635,

NONCODE: NONHSAT179904.1,

URS0001BCCF51_9606 lncRNA 3103 1

LncBook: HSALNT0261634,

ENSG00000267879 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267879 Gene

No ASD Table

Relevant External Links for ENSG00000267879 Gene

GeneLoc Exon Structure for
ENSG00000267879

No data available for mRNA/cDNA for ENSG00000267879 Gene

Expression for ENSG00000267879 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267879 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000267879 Gene

This gene is overexpressed in Testis (x13.8), Brain - Spinal cord (cervical c-1) (x12.2), and Brain - Substantia nigra (x6.6).
genes like me logo Genes that share expression patterns with ENSG00000267879: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267879 Gene

Orthologs for ENSG00000267879 Gene

Evolution for ENSG00000267879 Gene

ENSEMBL:
Gene Tree for ENSG00000267879 (if available)
TreeFam:
Gene Tree for ENSG00000267879 (if available)

No data available for Orthologs for ENSG00000267879 Gene

Paralogs for ENSG00000267879 Gene

No data available for Paralogs for ENSG00000267879 Gene

Variants for ENSG00000267879 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267879 Gene

Disorders for ENSG00000267879 Gene

No disorders were found for ENSG00000267879 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267879 Gene

Publications for ENSG00000267879 Gene

No publications were found for ENSG00000267879 Gene.

No data available for Mastermind for ENSG00000267879 Gene

Products for ENSG00000267879 Gene

Sources for ENSG00000267879 Gene