Aliases for ENSG00000267764 Gene

Subcategory (RNA class) for ENSG00000267764 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000267764 Gene

  • Novel Transcript, Antisense To CTIF 5
  • NONHSAG023821.2 91
  • Lnc-SMAD7-2 165
  • AC093567.1 5

External Ids for ENSG00000267764 Gene

Additional External Ids for ENSG00000267764 Gene

Previous GeneCards Identifiers for ENSG00000267764 Gene

  • GC18M046352
  • GC18M048826

Summaries for ENSG00000267764 Gene

GeneCards Summary for ENSG00000267764 Gene

ENSG00000267764 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267764 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267764 Gene

Genomics for ENSG00000267764 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267764 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J048831 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.3 1310 4.6 KDM1A POLR2A BACH1 RELA ZIC2 SMAD5 IKZF2 ZNF341 PKNOX1 EED ENSG00000267764 SMAD7 LOC105372105 LOC105372106 CTIF
GH18J048824 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.1 7082 5.8 TEAD4 RFX1 LEF1 ZNF692 PRDM1 ZIC2 PKNOX1 MTA1 PATZ1 ZNF740 SMAD7 ENSG00000267764 LOC105372106 CTIF
GH18J048838 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -6.4 -6406 6 PRDM1 ZIC2 SP1 ZNF341 ZNF148 SCRT2 CEBPB RFX1 EGR1 ZNF266 SMAD7 LOC100129878 RPL17 LOC105372105 ENSG00000267764 CTIF
GH18J048812 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +20.4 20420 5.6 ZNF629 PRDM10 RFX1 LEF1 JUND RELA ZNF24 DPF2 EED NONO SMAD7 ZBTB7C LOC105372106 ENSG00000267764 CTIF
GH18J048820 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +13.4 13420 2 SP1 PRDM10 BACH1 ZNF143 TCF12 IKZF2 TRIM22 IRF3 PKNOX1 EED SMAD7 ENSG00000267764 LOC105372106 CTIF
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267764 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267764 Gene

Genomic Locations for ENSG00000267764 Gene
chr18:48,812,916-48,834,821
(GRCh38/hg38)
Size:
21,906 bases
Orientation:
Minus strand
chr18:46,352,422-46,361,141
(GRCh37/hg19)
Size:
8,720 bases
Orientation:
Minus strand

Genomic View for ENSG00000267764 Gene

Genes around ENSG00000267764 on UCSC Golden Path with GeneCards custom track
ENSG00000267764 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267764 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267764 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267764 Gene

Proteins for ENSG00000267764 Gene

Post-translational modifications for ENSG00000267764 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267764 Gene

Domains & Families for ENSG00000267764 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267764 Gene

Function for ENSG00000267764 Gene

Phenotypes From GWAS Catalog for ENSG00000267764 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267764 Gene

Localization for ENSG00000267764 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267764 Gene

Pathways & Interactions for ENSG00000267764 Gene

PathCards logo

SuperPathways for ENSG00000267764 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267764 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267764 Gene

Drugs & Compounds for ENSG00000267764 Gene

No Compound Related Data Available

Transcripts for ENSG00000267764 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267764 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005A020C_9606 lncRNA 877 3

Ensembl: ENST00000590649 (view in UCSC) , ENST00000635105 (view in UCSC) ,

LNCipedia: lnc-SMAD7-2:1,

NONCODE: NONHSAT059201.2,

URS0000D5A329_9606 lncRNA 5280 1

LNCipedia: lnc-SMAD7-2:2,

URS0000D595A3_9606 lncRNA 2366 1

LNCipedia: lnc-SMAD7-2:3,

URS0000D5852D_9606 lncRNA 885 1

LNCipedia: lnc-SMAD7-2:4,

ENSG00000267764 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267764 Gene

No ASD Table

Relevant External Links for ENSG00000267764 Gene

GeneLoc Exon Structure for
ENSG00000267764

No data available for mRNA/cDNA for ENSG00000267764 Gene

Expression for ENSG00000267764 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267764 Gene

genes like me logo Genes that share expression patterns with ENSG00000267764: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267764 Gene

Orthologs for ENSG00000267764 Gene

Evolution for ENSG00000267764 Gene

ENSEMBL:
Gene Tree for ENSG00000267764 (if available)
TreeFam:
Gene Tree for ENSG00000267764 (if available)

No data available for Orthologs for ENSG00000267764 Gene

Paralogs for ENSG00000267764 Gene

No data available for Paralogs for ENSG00000267764 Gene

Variants for ENSG00000267764 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267764 Gene

Disorders for ENSG00000267764 Gene

No disorders were found for ENSG00000267764 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267764 Gene

Publications for ENSG00000267764 Gene

No publications were found for ENSG00000267764 Gene.

No data available for Mastermind for ENSG00000267764 Gene

Products for ENSG00000267764 Gene

Sources for ENSG00000267764 Gene