Aliases for ENSG00000267662 Gene

Subcategory (RNA class) for ENSG00000267662 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000267662 Gene

  • Novel Transcript, Antisense To TSHZ3 5
  • NONHSAG025440.2 91
  • NONHSAG025439.2 91
  • HSALNG0125320 164
  • HSALNG0125322 164
  • Lnc-ZNF536-8 165
  • AC025809.1 5

External Ids for ENSG00000267662 Gene

Previous GeneCards Identifiers for ENSG00000267662 Gene

  • GC19P031839

Summaries for ENSG00000267662 Gene

GeneCards Summary for ENSG00000267662 Gene

ENSG00000267662 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267662 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267662 Gene

Genomics for ENSG00000267662 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267662 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J031347 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.4 1361 5.7 CREB1 PRDM10 ZNF629 ZNF512 ZNF692 PRDM1 ZIC2 ZSCAN4 PATZ1 REST TSHZ3 ENSG00000267662 LOC107985311 lnc-ANKRD27-10 ZNF507 ENSG00000278875 THEG5
GH19J031357 Enhancer 0.7 ENCODE 0.4 +8.4 8369 0.1 CTCF PRDM10 ZNF629 KDM1A ZNF692 ZIC2 PATZ1 EZH2 ZNF561 SP2 ENSG00000267662 ENSG00000278875 LOC107985311 TSHZ3 THEG5
GH19J031377 Enhancer 0.9 Ensembl ENCODE 0.3 +29.5 29490 2.1 ZNF629 ZNF600 ZNF792 JUND ZXDB TSHZ1 ZSCAN5C OSR2 FOS FOSL1 TSHZ3 ENSG00000278875 ENSG00000267662 LOC107985311 ENSG00000267636 THEG5
GH19J031359 Enhancer 0.6 Ensembl 0.4 +7.8 7820 0.2 ZNF629 PRDM1 EZH2 SCRT2 ZNF10 ZBTB17 SCRT1 ZBTB11 OVOL3 ZNF335 ZNF507 ENSG00000267662 ENSG00000278875 LOC107985311 TSHZ3 THEG5
GH19J031355 Enhancer 0.5 ENCODE 0.4 +6.7 6669 0.2 PRDM1 EZH2 YY1 ZNF143 SP1 EGR1 JUND ENSG00000267662 ENSG00000278875 LOC107985311 TSHZ3 THEG5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267662 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267662 Gene

Genomic Locations for ENSG00000267662 Gene
chr19:31,348,881-31,417,794
(GRCh38/hg38)
Size:
68,914 bases
Orientation:
Plus strand
chr19:31,839,787-31,908,700
(GRCh37/hg19)
Size:
68,914 bases
Orientation:
Plus strand

Genomic View for ENSG00000267662 Gene

Genes around ENSG00000267662 on UCSC Golden Path with GeneCards custom track
ENSG00000267662 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267662 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267662 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267662 Gene

Proteins for ENSG00000267662 Gene

Post-translational modifications for ENSG00000267662 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267662 Gene

Domains & Families for ENSG00000267662 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267662 Gene

Function for ENSG00000267662 Gene

Phenotypes From GWAS Catalog for ENSG00000267662 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267662 Gene

Localization for ENSG00000267662 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267662 Gene

Pathways & Interactions for ENSG00000267662 Gene

PathCards logo

SuperPathways for ENSG00000267662 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267662 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267662 Gene

Drugs & Compounds for ENSG00000267662 Gene

No Compound Related Data Available

Transcripts for ENSG00000267662 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267662 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001DD3C1_9606 lncRNA 560 4

Ensembl: ENST00000585336 (view in UCSC) ,

LncBook: HSALNT0258323,

LNCipedia: lnc-ZNF536-8:1,

NONCODE: NONHSAT064138.2,

URS00008B4415_9606 lncRNA 549 3

LncBook: HSALNT0258331,

LNCipedia: lnc-ZNF536-8:20,

NONCODE: NONHSAT064142.2,

URS00008BA1CC_9606 lncRNA 23974 2

LNCipedia: lnc-ZNF536-8:2,

NONCODE: NONHSAT064139.2,

URS0000D59BAC_9606 lncRNA 3260 2

LncBook: HSALNT0258324,

LNCipedia: lnc-ZNF536-8:6,

URS00008BA8FA_9606 lncRNA 1802 2

LncBook: HSALNT0258327,

LNCipedia: lnc-ZNF536-8:4,

ENSG00000267662 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267662 Gene

No ASD Table

Relevant External Links for ENSG00000267662 Gene

GeneLoc Exon Structure for
ENSG00000267662

No data available for mRNA/cDNA for ENSG00000267662 Gene

Expression for ENSG00000267662 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267662 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000267662 Gene

This gene is overexpressed in Ovary (x11.2) and Cervix - Endocervix (x5.6).
genes like me logo Genes that share expression patterns with ENSG00000267662: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267662 Gene

Orthologs for ENSG00000267662 Gene

Evolution for ENSG00000267662 Gene

ENSEMBL:
Gene Tree for ENSG00000267662 (if available)
TreeFam:
Gene Tree for ENSG00000267662 (if available)

No data available for Orthologs for ENSG00000267662 Gene

Paralogs for ENSG00000267662 Gene

No data available for Paralogs for ENSG00000267662 Gene

Variants for ENSG00000267662 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267662 Gene

Disorders for ENSG00000267662 Gene

Additional Disease Information for ENSG00000267662

No disorders were found for ENSG00000267662 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000267662 Gene

Publications for ENSG00000267662 Gene

No publications were found for ENSG00000267662 Gene.

No data available for Mastermind for ENSG00000267662 Gene

Products for ENSG00000267662 Gene

Sources for ENSG00000267662 Gene