Aliases for ENSG00000267563 Gene

Subcategory (RNA class) for ENSG00000267563 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000267563 Gene

  • Novel Transcript, Antisense To MLLT1 5
  • NONHSAG024594.2 91
  • HSALNG0123532 164
  • Lnc-ACSBG2-3 165
  • AC011471.2 5

External Ids for ENSG00000267563 Gene

Summaries for ENSG00000267563 Gene

GeneCards Summary for ENSG00000267563 Gene

ENSG00000267563 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267563 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267563 Gene

Genomics for ENSG00000267563 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267563 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J006264 Enhancer 0.8 Ensembl ENCODE 600.7 -1.3 -1347 0.4 IKZF2 EED RELB RUNX3 ZBTB40 ARNT ELF1 NBN EBF1 TBX21 ENSG00000267563 MLLT1 lnc-MLLT1-2 RFX2
GH19J006259 Enhancer 0.8 ENCODE dbSUPER 600.7 +0.6 578 1 REST SP1 FOXA2 YY1 GABPA JUND RAD21 HNF4A RXRA MAX ENSG00000267563 FUT5 ENSG00000280394 MLLT1 RFX2
GH19J006260 Enhancer 0.6 ENCODE dbSUPER 600.7 +1.9 1908 0.2 CTCF REST RAD21 SMC3 ZNF143 XRCC5 ENSG00000267563 ENSG00000280394 MLLT1 RFX2
GH19J006262 Enhancer 0.6 ENCODE 600.7 -1.0 -1012 0.2 IKZF2 PKNOX1 EED RELB RUNX3 ARNT ELF1 NBN TBX21 MTA2 ENSG00000267563 MLLT1 lnc-MLLT1-2 RFX2
GH19J006258 Enhancer 0.6 ENCODE dbSUPER 600.7 -0.2 -157 0.2 ZKSCAN1 ZMYM3 YY1 ENSG00000267563 MLLT1 lnc-MLLT1-2 RFX2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267563 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267563 Gene

Genomic Locations for ENSG00000267563 Gene
chr19:6,259,157-6,259,799
(GRCh38/hg38)
Size:
643 bases
Orientation:
Plus strand
chr19:6,259,168-6,259,810
(GRCh37/hg19)
Size:
643 bases
Orientation:
Plus strand

Genomic View for ENSG00000267563 Gene

Genes around ENSG00000267563 on UCSC Golden Path with GeneCards custom track
ENSG00000267563 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267563 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267563 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267563 Gene

Proteins for ENSG00000267563 Gene

Post-translational modifications for ENSG00000267563 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267563 Gene

Domains & Families for ENSG00000267563 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267563 Gene

Function for ENSG00000267563 Gene

Phenotypes From GWAS Catalog for ENSG00000267563 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267563 Gene

Localization for ENSG00000267563 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267563 Gene

Pathways & Interactions for ENSG00000267563 Gene

PathCards logo

SuperPathways for ENSG00000267563 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267563 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267563 Gene

Drugs & Compounds for ENSG00000267563 Gene

No Compound Related Data Available

Transcripts for ENSG00000267563 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267563 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000029AFC3_9606 lncRNA 523 4

Ensembl: ENST00000588192 (view in UCSC) ,

LncBook: HSALNT0255051,

LNCipedia: lnc-ACSBG2-3:1,

NONCODE: NONHSAT060750.2,

ENSG00000267563 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267563 Gene

No ASD Table

Relevant External Links for ENSG00000267563 Gene

GeneLoc Exon Structure for
ENSG00000267563

No data available for mRNA/cDNA for ENSG00000267563 Gene

Expression for ENSG00000267563 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267563 Gene

genes like me logo Genes that share expression patterns with ENSG00000267563: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267563 Gene

Orthologs for ENSG00000267563 Gene

Evolution for ENSG00000267563 Gene

ENSEMBL:
Gene Tree for ENSG00000267563 (if available)
TreeFam:
Gene Tree for ENSG00000267563 (if available)

No data available for Orthologs for ENSG00000267563 Gene

Paralogs for ENSG00000267563 Gene

No data available for Paralogs for ENSG00000267563 Gene

Variants for ENSG00000267563 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267563 Gene

Disorders for ENSG00000267563 Gene

No disorders were found for ENSG00000267563 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267563 Gene

Publications for ENSG00000267563 Gene

No publications were found for ENSG00000267563 Gene.

No data available for Mastermind for ENSG00000267563 Gene

Products for ENSG00000267563 Gene

Sources for ENSG00000267563 Gene