Aliases for ENSG00000267439 Gene

Subcategory (RNA class) for ENSG00000267439 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000267439 Gene

  • Novel Transcript 5
  • NONHSAG025601.2 91
  • HSALNG0125657 164
  • Lnc-HSPB6-1 165
  • AD000671.3 5

External Ids for ENSG00000267439 Gene

Previous GeneCards Identifiers for ENSG00000267439 Gene

  • GC19M036365
  • GC19M036556
  • GC19M037088
  • GC19M035763
  • GC19M035909
  • GC19M038988
  • GC19M039127
  • GC19M039193
  • GC19M041407
  • GC19M035935
  • GC19M036799
  • GC19M037400
  • GC19M037732
  • GC19M038028
  • GC19M038326
  • GC19M038621
  • GC19M038861

Summaries for ENSG00000267439 Gene

GeneCards Summary for ENSG00000267439 Gene

ENSG00000267439 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267439 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267439 Gene

Genomics for ENSG00000267439 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267439 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J035753 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.9 -2905 6.6 SP1 CREB1 HNRNPL TEAD4 PRDM10 ZNF629 RFX1 SIX5 LEF1 ZNF692 PROSER3 ENSG00000267328 HSPB6 lnc-HSPB6-2 U2AF1L4 COX6B1 HAUS5 ENSG00000267049 KMT2B TMEM147-AS1
GH19J035739 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +8.8 8775 10.3 BRCA1 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 PRDM10 ZNF629 U2AF1L4 LIN37 ENSG00000188223 ENSG00000267120 IGFLR1 NONHSAG025600.2 PSENEN lnc-IGFLR1-1 TMEM147-AS1 ZNF567
GH19J035749 Enhancer 0.8 FANTOM5 ENCODE 0.7 +3.0 2975 1.2 CREB1 PRDM10 ZNF600 SIN3A KLF9 DPF2 ELF1 ZBTB1 HIC1 ZNF658 COX6B1 U2AF1L4 UPK1A LRFN3 MAG ENSG00000188223 ENSG00000267439 LIN37 NONHSAG025600.2 HSPB6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267439 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267439 Gene

Genomic Locations for ENSG00000267439 Gene
chr19:35,747,057-35,753,415
(GRCh38/hg38)
Size:
6,359 bases
Orientation:
Minus strand
chr19:36,237,958-36,244,316
(GRCh37/hg19)
Size:
6,359 bases
Orientation:
Minus strand

Genomic View for ENSG00000267439 Gene

Genes around ENSG00000267439 on UCSC Golden Path with GeneCards custom track
ENSG00000267439 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267439 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267439 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267439 Gene

Proteins for ENSG00000267439 Gene

Post-translational modifications for ENSG00000267439 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267439 Gene

Domains & Families for ENSG00000267439 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267439 Gene

Function for ENSG00000267439 Gene

Phenotypes From GWAS Catalog for ENSG00000267439 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267439 Gene

Localization for ENSG00000267439 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267439 Gene

Pathways & Interactions for ENSG00000267439 Gene

PathCards logo

SuperPathways for ENSG00000267439 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267439 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267439 Gene

Drugs & Compounds for ENSG00000267439 Gene

No Compound Related Data Available

Transcripts for ENSG00000267439 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267439 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005FC995_9606 lncRNA 585 4

Ensembl: ENST00000585365 (view in UCSC) ,

LncBook: HSALNT0258982,

LNCipedia: lnc-HSPB6-1:3,

NONCODE: NONHSAT065907.2,

URS000077102B_9606 lncRNA 1712 3

Ensembl: ENST00000591091 (view in UCSC) ,

LNCipedia: lnc-HSPB6-1:2,

NONCODE: NONHSAT065908.2,

URS0000D5CDF7_9606 lncRNA 1692 1

LNCipedia: lnc-HSPB6-1:1,

ENSG00000267439 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267439 Gene

No ASD Table

Relevant External Links for ENSG00000267439 Gene

GeneLoc Exon Structure for
ENSG00000267439

No data available for mRNA/cDNA for ENSG00000267439 Gene

Expression for ENSG00000267439 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267439 Gene

genes like me logo Genes that share expression patterns with ENSG00000267439: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267439 Gene

Orthologs for ENSG00000267439 Gene

Evolution for ENSG00000267439 Gene

ENSEMBL:
Gene Tree for ENSG00000267439 (if available)
TreeFam:
Gene Tree for ENSG00000267439 (if available)

No data available for Orthologs for ENSG00000267439 Gene

Paralogs for ENSG00000267439 Gene

No data available for Paralogs for ENSG00000267439 Gene

Variants for ENSG00000267439 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267439 Gene

Disorders for ENSG00000267439 Gene

No disorders were found for ENSG00000267439 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267439 Gene

Publications for ENSG00000267439 Gene

No publications were found for ENSG00000267439 Gene.

No data available for Mastermind for ENSG00000267439 Gene

Products for ENSG00000267439 Gene

Sources for ENSG00000267439 Gene