Aliases for ENSG00000267417 Gene

Subcategory (RNA class) for ENSG00000267417 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000267417 Gene

  • Novel Transcript, Antisense To NFIX 5
  • Lnc-GADD45GIP1-2 168
  • NONHSAG024915 92
  • AC138474.1 5

External Ids for ENSG00000267417 Gene

Previous GeneCards Identifiers for ENSG00000267417 Gene

  • GC19M013124

Summaries for ENSG00000267417 Gene

GeneCards Summary for ENSG00000267417 Gene

ENSG00000267417 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267417 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267417 Gene

Genomics for ENSG00000267417 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000267417 Gene

Promoters and enhancers for ENSG00000267417 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J013011 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.7 -5684 17.2 EP300 FOXK2 HNRNPK ZSCAN5C NRF1 POLR2G NCOR1 JUND FOS TEAD4 NFIX ZNF709 TRMT1 ZNF136 ZNF44 ZNF20 CCDC130 ZNF625 ZNF564 ZNF844
GH19J012994 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +17.8 17771 4.7 CTCF NRF1 PHB2 ZIC2 ZBTB10 CLOCK GABPA ZBTB26 MYC TGIF2 NFIX ZNF20 TRMT1 ZNF136 ENSG00000213293 ZNF44 ZNF799 FBXW9 ZNF490 ZNF433
GH19J013000 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.6 12571 3.4 ZBTB17 BCOR HIC1 ZMYM3 ZFP36 ZFX ZNF366 KDM1A CTCF HNRNPL MAST1 GCDH MAN2B1 RPL12P42 STX10 TNPO2 ZNF490 NFIX ENSG00000267417
GH19J013005 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +6.9 6897 3.8 CTCF ZIC2 ESRRA ZNF195 POLR2G ZNF112 ZFHX2 HIC1 RXRA ZBTB33 ENSG00000230310 ZNF709 ENSG00000268945 ENSG00000242615 ZNF788P CALR ENSG00000267417 NFIX
GH19J013010 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.0 3966 0.5 USF1 PRPF4 CBX8 SUZ12 RNF2 AGO2 ZFX CTBP2 EZH2 PRDM10 ENSG00000267417 NFIX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267417 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000267417 Gene

Genomic Locations for ENSG00000267417 Gene
chr19:13,013,662-13,014,511
(GRCh38/hg38)
Size:
850 bases
Orientation:
Minus strand
chr19:13,124,476-13,125,325
(GRCh37/hg19)
Size:
850 bases
Orientation:
Minus strand

Genomic View for ENSG00000267417 Gene

Genes around ENSG00000267417 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000267417 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267417 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267417 Gene

Proteins for ENSG00000267417 Gene

Post-translational modifications for ENSG00000267417 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267417 Gene

Domains & Families for ENSG00000267417 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267417 Gene

Function for ENSG00000267417 Gene

Phenotypes From GWAS Catalog for ENSG00000267417 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267417 Gene

Localization for ENSG00000267417 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267417 Gene

Pathways & Interactions for ENSG00000267417 Gene

PathCards logo

SuperPathways for ENSG00000267417 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000267417 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267417 Gene

Drugs & Compounds for ENSG00000267417 Gene

No Compound Related Data Available

Transcripts for ENSG00000267417 Gene

mRNA/cDNA for ENSG00000267417 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267417 Gene

No ASD Table

Relevant External Links for ENSG00000267417 Gene

GeneLoc Exon Structure for
ENSG00000267417

Expression for ENSG00000267417 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267417 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000267417 Gene

This gene is overexpressed in Muscle - Skeletal (x11.1).
genes like me logo Genes that share expression patterns with ENSG00000267417: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267417 Gene

Orthologs for ENSG00000267417 Gene

Evolution for ENSG00000267417 Gene

ENSEMBL:
Gene Tree for ENSG00000267417 (if available)
TreeFam:
Gene Tree for ENSG00000267417 (if available)

No data available for Orthologs for ENSG00000267417 Gene

Paralogs for ENSG00000267417 Gene

No data available for Paralogs for ENSG00000267417 Gene

Variants for ENSG00000267417 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267417 Gene

Disorders for ENSG00000267417 Gene

No disorders were found for ENSG00000267417 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267417 Gene

Publications for ENSG00000267417 Gene

No publications were found for ENSG00000267417 Gene.

No data available for Mastermind for ENSG00000267417 Gene

Products for ENSG00000267417 Gene

Sources for ENSG00000267417 Gene