Aliases for ENSG00000267372 Gene

Subcategory (RNA class) for ENSG00000267372 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000267372 Gene

  • Novel Transcript 5
  • NONHSAG024354.2 91
  • HSALNG0123007 164
  • Lnc-EFNA2-1 165
  • AC005330.1 5

External Ids for ENSG00000267372 Gene

Summaries for ENSG00000267372 Gene

GeneCards Summary for ENSG00000267372 Gene

ENSG00000267372 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267372 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267372 Gene

Genomics for ENSG00000267372 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267372 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J001321 Enhancer 0.5 Ensembl 620.4 -0.1 -124 0.6 ZNF335 ZNF18 ZNF146 GLIS1 KLF1 ZNF362 ZNF384 ZBTB6 ENSG00000267372 piR-40922 PWWP3A EFNA2
GH19J001320 Enhancer 0.5 Ensembl 600.7 -0.9 -924 0.2 PKNOX1 OSR2 ZNF335 ZNF664 MEIS2 KLF1 ZMYM3 KDM1A ZNF121 ENSG00000267372 piR-40922 PWWP3A EFNA2
GH19J001322 Enhancer 0.5 Ensembl 620.8 +1.5 1476 0.2 POLR2A HIC1 ZNF366 ZNF202 ZNF48 ENSG00000267372 SF3A2 DAZAP1 LOC100288123 TMEM259 TCF3 CIRBP MIER2 GRIN3B DOT1L
GH19J001325 Promoter/Enhancer 1.4 ENCODE CraniofacialAtlas 21.4 +4.1 4125 1.2 HNRNPL GATAD2A PRDM10 ZNF629 RFX1 ZNF692 JUND ZIC2 RBFOX2 RXRB SF3A2 DAZAP1 ENSG00000267372 TMEM259 MIER2 GRIN3B LOC100288123 TCF3 ENSG00000267283 CIRBP
GH19J001329 Enhancer 0.6 Ensembl CraniofacialAtlas 19.2 +10.5 10476 1 PKNOX1 ZNF600 MGA EGR1 MEIS2 LARP7 ENSG00000267372 piR-41406-033 PWWP3A EFNA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267372 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267372 Gene

Genomic Locations for ENSG00000267372 Gene
chr19:1,321,225-1,322,864
(GRCh38/hg38)
Size:
1,640 bases
Orientation:
Plus strand
chr19:1,321,224-1,322,863
(GRCh37/hg19)
Size:
1,640 bases
Orientation:
Plus strand

Genomic View for ENSG00000267372 Gene

Genes around ENSG00000267372 on UCSC Golden Path with GeneCards custom track
ENSG00000267372 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267372 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267372 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267372 Gene

Proteins for ENSG00000267372 Gene

Post-translational modifications for ENSG00000267372 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267372 Gene

Domains & Families for ENSG00000267372 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267372 Gene

Function for ENSG00000267372 Gene

Phenotypes From GWAS Catalog for ENSG00000267372 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267372 Gene

Localization for ENSG00000267372 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267372 Gene

Pathways & Interactions for ENSG00000267372 Gene

PathCards logo

SuperPathways for ENSG00000267372 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267372 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267372 Gene

Drugs & Compounds for ENSG00000267372 Gene

No Compound Related Data Available

Transcripts for ENSG00000267372 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267372 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075F48F_9606 lncRNA 1238 2

Ensembl: ENST00000590086 (view in UCSC) ,

LNCipedia: lnc-EFNA2-1:2,

URS00000146CB_9606 lncRNA 1256 3

LncBook: HSALNT0254208,

LNCipedia: lnc-EFNA2-1:1,

NONCODE: NONHSAT060281.2,

ENSG00000267372 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267372 Gene

No ASD Table

Relevant External Links for ENSG00000267372 Gene

GeneLoc Exon Structure for
ENSG00000267372

No data available for mRNA/cDNA for ENSG00000267372 Gene

Expression for ENSG00000267372 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267372 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000267372 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x5.4), Brain - Nucleus accumbens (basal ganglia) (x5.3), Brain - Hippocampus (x5.0), Brain - Cortex (x4.9), Brain - Amygdala (x4.7), Brain - Putamen (basal ganglia) (x4.7), Brain - Frontal Cortex (BA9) (x4.6), and Brain - Caudate (basal ganglia) (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000267372: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267372 Gene

Orthologs for ENSG00000267372 Gene

Evolution for ENSG00000267372 Gene

ENSEMBL:
Gene Tree for ENSG00000267372 (if available)
TreeFam:
Gene Tree for ENSG00000267372 (if available)

No data available for Orthologs for ENSG00000267372 Gene

Paralogs for ENSG00000267372 Gene

No data available for Paralogs for ENSG00000267372 Gene

Variants for ENSG00000267372 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267372 Gene

Disorders for ENSG00000267372 Gene

Additional Disease Information for ENSG00000267372

No disorders were found for ENSG00000267372 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000267372 Gene

Publications for ENSG00000267372 Gene

No publications were found for ENSG00000267372 Gene.

No data available for Mastermind for ENSG00000267372 Gene

Products for ENSG00000267372 Gene

Sources for ENSG00000267372 Gene