Aliases for ENSG00000267311 Gene

Subcategory (RNA class) for ENSG00000267311 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000267311 Gene

  • Novel Transcript, Sense Intronic To RAB27B 5
  • NONHSAG023900.2 91
  • HSALNG0121664 164
  • Lnc-DYNAP-1 165
  • AC007673.1 5

External Ids for ENSG00000267311 Gene

Previous GeneCards Identifiers for ENSG00000267311 Gene

  • GC18P052547

Summaries for ENSG00000267311 Gene

GeneCards Summary for ENSG00000267311 Gene

ENSG00000267311 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267311 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267311 Gene

Genomics for ENSG00000267311 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267311 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J054879 Enhancer 0.8 Ensembl ENCODE 606.9 +1.3 1344 2 RFX1 EP300 JUN NCOR1 FOSL1 TAL1 HDAC2 HNF4A VEZF1 TCF12 ENSG00000267311 RAB27B CCDC68 NONHSAG023902.2
GH18J054878 Enhancer 0.6 Ensembl 600.7 -0.9 -876 0.8 PKNOX1 POLR2A HDAC2 NCOR1 TAL1 BHLHE40 HNF4A TCF12 KDM1A MEIS2 ENSG00000267311 RAB27B CCDC68 piR-48325-079
GH18J054957 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 5 +80.2 80220 5 CREB1 ATF7 ZNF629 RBFOX2 IKZF2 SP1 ZNF341 ZNF561 SOX13 ZBTB20 CCDC68 POLI ENSG00000267311 lnc-CCDC68-3 TCF4
GH18J054232 Enhancer 0.9 Ensembl ENCODE 4.7 -645.0 -644978 4.6 CREB1 TEAD4 ZHX2 SOX6 CTBP1 ZSCAN29 ZNF316 PKNOX1 FOSL1 CUX1 POLI C18orf54 STARD6 ENSG00000267311 FJ601666-035 MBD2 MG828559
GH18J054967 Enhancer 0.7 Ensembl ENCODE 5.1 +89.1 89070 1.8 CEBPB CHD2 JUN RCOR1 JUND EP300 TCF7L2 GTF3C2 SPI1 CCDC68 ENSG00000267311 lnc-CCDC68-3 TCF4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267311 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267311 Gene

Genomic Locations for ENSG00000267311 Gene
chr18:54,879,457-54,880,809
(GRCh38/hg38)
Size:
1,353 bases
Orientation:
Plus strand
chr18:52,546,688-52,548,040
(GRCh37/hg19)
Size:
1,353 bases
Orientation:
Plus strand

Genomic View for ENSG00000267311 Gene

Genes around ENSG00000267311 on UCSC Golden Path with GeneCards custom track
ENSG00000267311 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267311 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267311 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267311 Gene

Proteins for ENSG00000267311 Gene

Post-translational modifications for ENSG00000267311 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267311 Gene

Domains & Families for ENSG00000267311 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267311 Gene

Function for ENSG00000267311 Gene

Phenotypes From GWAS Catalog for ENSG00000267311 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267311 Gene

Localization for ENSG00000267311 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267311 Gene

Pathways & Interactions for ENSG00000267311 Gene

PathCards logo

SuperPathways for ENSG00000267311 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267311 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267311 Gene

Drugs & Compounds for ENSG00000267311 Gene

No Compound Related Data Available

Transcripts for ENSG00000267311 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267311 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000526F81_9606 lncRNA 1100 4

Ensembl: ENST00000590604 (view in UCSC) ,

LncBook: HSALNT0251468,

LNCipedia: lnc-DYNAP-1:2,

NONCODE: NONHSAT059354.2,

ENSG00000267311 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267311 Gene

No ASD Table

Relevant External Links for ENSG00000267311 Gene

GeneLoc Exon Structure for
ENSG00000267311

No data available for mRNA/cDNA for ENSG00000267311 Gene

Expression for ENSG00000267311 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267311 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000267311 Gene

This gene is overexpressed in Testis (x35.3).
genes like me logo Genes that share expression patterns with ENSG00000267311: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267311 Gene

Orthologs for ENSG00000267311 Gene

Evolution for ENSG00000267311 Gene

ENSEMBL:
Gene Tree for ENSG00000267311 (if available)
TreeFam:
Gene Tree for ENSG00000267311 (if available)

No data available for Orthologs for ENSG00000267311 Gene

Paralogs for ENSG00000267311 Gene

No data available for Paralogs for ENSG00000267311 Gene

Variants for ENSG00000267311 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267311 Gene

Disorders for ENSG00000267311 Gene

Additional Disease Information for ENSG00000267311

No disorders were found for ENSG00000267311 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000267311 Gene

Publications for ENSG00000267311 Gene

No publications were found for ENSG00000267311 Gene.

No data available for Mastermind for ENSG00000267311 Gene

Products for ENSG00000267311 Gene

Sources for ENSG00000267311 Gene