ENSG00000267197 Gene (RNA Gene)

 

GC19M010490
GIFtS:
6
See more...

Aliases for ENSG00000267197 Gene

Subcategory (RNA class) for ENSG00000267197 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000267197 Gene

  • Novel Transcript, Sense Intronic With KEAP1 5
  • NONHSAG024795.2 91
  • HSALNG0123939 164
  • Lnc-S1PR5-1 165
  • AC011461.1 5

External Ids for ENSG00000267197 Gene

Previous GeneCards Identifiers for ENSG00000267197 Gene

  • GC19M010601

Summaries for ENSG00000267197 Gene

GeneCards Summary for ENSG00000267197 Gene

ENSG00000267197 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267197 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267197 Gene

Genomics for ENSG00000267197 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ENSG00000267197 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH19J010492 Enhancer 0.8 ENCODE 600.7 -1.3 -1280 0.1 CTCF ZBTB33 KDM1A PHF21A RBFOX2 PKNOX1 ZNF740 ZNF24 HDAC1 SOX6 ENSG00000267197 KEAP1 CDC37 lnc-TIMM29-1
GH19J010501 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -11.5 -11507 3 RNF2 SP1 HNRNPL GATAD2A ZBTB33 PRDM10 ZNF512 ZNF692 POLR2A RCOR2 KEAP1 ILF3 KRI1 RAVER1 DNMT1 FBXL12 LOC100419831 PPAN PRKCSH ZNF561
GH19J010486 Enhancer 0.7 ENCODE 0.7 +4.4 4419 0.8 GATAD2A RFX1 ESR1 CTBP1 TGIF2 ZBTB25 SAP130 KLF9 ZNF335 NCOA3 ENSG00000267197 lnc-PDE4A-2 KEAP1 CDC37 lnc-TIMM29-1
GH19J010498 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.3 -8320 2.6 CREB1 REST KDM1A BACH1 ZIC2 RBFOX2 SP1 YY1 POLR2A CEBPG KEAP1 ENSG00000267197 CDC37 lnc-TIMM29-1
GH19J010485 Enhancer 0.6 ENCODE 0.7 +4.9 4940 0.2 GATAD2A FOXA1 RBFOX2 TGIF2 ZBTB25 SAP130 GATA3 ZNF335 JUND ZGPAT ENSG00000267197 lnc-PDE4A-2 KEAP1 CDC37 lnc-TIMM29-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267197 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267197 Gene

Genomic Locations for ENSG00000267197 Gene
chr19:10,490,339-10,491,000
(GRCh38/hg38)
Size:
662 bases
Orientation:
Minus strand
chr19:10,601,015-10,601,676
(GRCh37/hg19)
Size:
662 bases
Orientation:
Minus strand

Genomic View for ENSG00000267197 Gene

Genes around ENSG00000267197 on UCSC Golden Path with GeneCards custom track
ENSG00000267197 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267197 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267197 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000267197 Gene

Proteins for ENSG00000267197 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000267197 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267197 Gene

Domains & Families for ENSG00000267197 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267197 Gene

Function for ENSG00000267197 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267197 Gene

Localization for ENSG00000267197 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267197 Gene

Pathways & Interactions for ENSG00000267197 Gene

PathCards logo

SuperPathways for ENSG00000267197 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267197 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267197 Gene

Drugs & Compounds for ENSG00000267197 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000267197 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267197 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000012A22B_9606 lncRNA 357 4

Ensembl: ENST00000592671 (view in UCSC) ,

LncBook: HSALNT0255690,

LNCipedia: lnc-S1PR5-1:1,

NONCODE: NONHSAT061071.2,

ENSG00000267197 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267197 Gene

No ASD Table

Relevant External Links for ENSG00000267197 Gene

GeneLoc Exon Structure for
ENSG00000267197

No data available for mRNA/cDNA for ENSG00000267197 Gene

Expression for ENSG00000267197 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267197 Gene

mRNA expression in normal human tissues for ENSG00000267197 Gene
mRNA expression by GTEx for ENSG00000267197 Gene
genes like me logo Genes that share expression patterns with ENSG00000267197: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267197 Gene

Orthologs for ENSG00000267197 Gene

Evolution for ENSG00000267197 Gene

ENSEMBL:
Gene Tree for ENSG00000267197 (if available)
TreeFam:
Gene Tree for ENSG00000267197 (if available)

No data available for Orthologs for ENSG00000267197 Gene

Paralogs for ENSG00000267197 Gene

No data available for Paralogs for ENSG00000267197 Gene

Variants for ENSG00000267197 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267197 Gene

Disorders for ENSG00000267197 Gene

No disorders were found for ENSG00000267197 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267197 Gene

Publications for ENSG00000267197 Gene

No publications were found for ENSG00000267197 Gene.

No data available for Mastermind for ENSG00000267197 Gene

Products for ENSG00000267197 Gene

Sources for ENSG00000267197 Gene