Aliases for ENSG00000267149 Gene

Data sources for ENSG00000267149 Gene:

RNA type for ENSG00000267149 Gene

lncRNA

Aliases for ENSG00000267149 Gene

External Ids for ENSG00000267149 Gene

Previous GeneCards Identifiers for ENSG00000267149 Gene

  • GC19M055538

Summaries for ENSG00000267149 Gene

GeneCards Summary for ENSG00000267149 Gene

ENSG00000267149 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267149 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267149 Gene

Genomics for ENSG00000267149 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267149 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J055061 Enhancer 0.5 Ensembl 250.7 -1.5 -1527 0.2 ATF2 NFE2 MAFG ZBTB21 CREB1 ATF7 HIC1 ENSG00000267149 RDH13 lnc-RDH13-2 GP6
GH19J055062 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 -3.8 -3826 2.4 SP1 JUND ZNF580 ATF2 BRCA1 CHD4 SMAD5 SIN3A ELK1 BHLHE40 RDH13 LENG8 ENSG00000235681 LENG8-AS1 CNOT3 U2AF2 ENSG00000267523 ZNF581 CDC42EP5 RPL28
GH19J055068 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.4 -11.3 -11272 3.3 ZNF600 JUND ZNF10 BRCA1 NFIC REST CEBPB DEK BHLHE40 ZNF341 EPS8L1 RDH13 lnc-RDH13-2 ENSG00000267149 GP6
GH19J055041 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +17.2 17216 1.3 NCOR1 IKZF1 REST MBD2 MNT RXRA ZNF316 SKIL ATF1 SUPT5H MN297617 lnc-RDH13-1 piR-43107-144 RDH13 NLRP7 NLRP2 GP6 HSALNG0127592 lnc-EPS8L1-1 ENSG00000267149
GH19J055038 Promoter/Enhancer 1.2 EPDnew dbSUPER 0.4 +20.9 20890 0.1 MYC NCOR1 IKZF1 NFIC REST SMAD5 HES1 MBD2 TBP MNT GP6 HSALNG0127592 lnc-EPS8L1-1 ENSG00000267149 RDH13 ENSG00000267265 GP6-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267149 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267149 Gene

Latest Assembly
chr19:55,027,592-55,059,174
(GRCh38/hg38)
Size:
31,583 bases
Orientation:
Minus strand

Previous Assembly
chr19:55,538,961-55,565,296
(GRCh37/hg19 by Ensembl)
Size:
26,336 bases
Orientation:
Minus strand

Genomic View for ENSG00000267149 Gene

Genes around ENSG00000267149 on UCSC Golden Path with GeneCards custom track
ENSG00000267149 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267149 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267149 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267149 Gene

Proteins for ENSG00000267149 Gene

Post-translational modifications for ENSG00000267149 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267149 Gene

Domains & Families for ENSG00000267149 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267149 Gene

Function for ENSG00000267149 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267149 Gene

Localization for ENSG00000267149 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267149 Gene

Pathways & Interactions for ENSG00000267149 Gene

PathCards logo

SuperPathways for ENSG00000267149 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267149 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267149 Gene

Drugs & Compounds for ENSG00000267149 Gene

No Compound Related Data Available

Transcripts for ENSG00000267149 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267149 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000D6EA88_9606 lncRNA 1271 2

Ensembl: ENST00000585492 (view in UCSC) ,

LNCipedia: lnc-RDH13-12:1,

URS0001BCD3DE_9606 lncRNA 1517 1

LncBook: HSALNT0262385,

URS0001BDFE0D_9606 lncRNA 584 1

LncBook: HSALNT0262384,

ENSG00000267149 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267149 Gene

No ASD Table

Relevant External Links for ENSG00000267149 Gene

GeneLoc Exon Structure for
ENSG00000267149

No data available for mRNA/cDNA for ENSG00000267149 Gene

Expression for ENSG00000267149 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267149 Gene

genes like me logo Genes that share expression patterns with ENSG00000267149: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267149 Gene

Orthologs for ENSG00000267149 Gene

Evolution for ENSG00000267149 Gene

ENSEMBL:
Gene Tree for ENSG00000267149 (if available)
TreeFam:
Gene Tree for ENSG00000267149 (if available)

No data available for Orthologs for ENSG00000267149 Gene

Paralogs for ENSG00000267149 Gene

No data available for Paralogs for ENSG00000267149 Gene

Variants for ENSG00000267149 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267149 Gene

Disorders for ENSG00000267149 Gene

No disorders were found for ENSG00000267149 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267149 Gene

Publications for ENSG00000267149 Gene

No publications were found for ENSG00000267149 Gene.

No data available for Mastermind for ENSG00000267149 Gene

Products for ENSG00000267149 Gene

Sources for ENSG00000267149 Gene