Aliases for ENSG00000267016 Gene

Data sources for ENSG00000267016 Gene:

Subcategory (RNA class) for ENSG00000267016 Gene

lncRNA

Aliases for ENSG00000267016 Gene

External Ids for ENSG00000267016 Gene

Previous GeneCards Identifiers for ENSG00000267016 Gene

  • GC17M075468

Summaries for ENSG00000267016 Gene

GeneCards Summary for ENSG00000267016 Gene

ENSG00000267016 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267016 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267016 Gene

Genomics for ENSG00000267016 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000267016 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J077470 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 250.7 -1.6 -1568 8.4 BCL11A FEZF1 FOXA1 MNT IKZF1 MBD2 ZIC2 SIN3A ZNF521 VEZF1 ENSG00000267016 SRSF2 SEPTIN9 ENSG00000200651 METTL23 PRCD ENSG00000267546 ENSG00000267263 HSALNG0118928 TNRC6C
GH17J077478 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -7.8 -7794 3.5 ZIC2 RBM22 GLIS1 RCOR1 ZMYM3 KDM1A HLF EGR2 CHD2 GLIS2 ENSG00000267016 HSALNG0118928 SEPTIN9 TNRC6C
GH17J077494 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -22.1 -22121 1.5 IRF2 ZNF217 CTCF ELF1 ZIC2 SIN3A REST TRIM22 SAP130 MIER3 HSALNG0118928 ENSG00000267016 SEPTIN9 TNRC6C
GH17J077484 Enhancer 0.9 ENCODE dbSUPER 0.4 -12.4 -12412 0.5 NONO ZNF521 ZNF148 ZBTB5 HES1 MLLT1 ZNF658 ESRRA YBX1 IRF5 ENSG00000267546 SRSF2 TNRC6C METTL23 TMC8 SNHG20 MFSD11 PRCD RHBDF2 ENSG00000272386
GH17J077489 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -17.3 -17305 2.1 RXRA RBM22 JUND HNF4A SCRT1 RAD21 SP1 POLR2A PAF1 HNRNPL HSALNG0118928 ENSG00000267016 SEPTIN9 TNRC6C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267016 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000267016 Gene

Latest Assembly
chr17:77,468,560-77,472,770
(GRCh38/hg38)
Size:
4,211 bases
Orientation:
Minus strand

Previous Assembly
chr17:75,465,244-75,468,852
(GRCh37/hg19 by Ensembl)
Size:
3,609 bases
Orientation:
Minus strand

Genomic View for ENSG00000267016 Gene

Genes around ENSG00000267016 on UCSC Golden Path with GeneCards custom track
ENSG00000267016 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000267016 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267016 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267016 Gene

Proteins for ENSG00000267016 Gene

Post-translational modifications for ENSG00000267016 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267016 Gene

Domains & Families for ENSG00000267016 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267016 Gene

Function for ENSG00000267016 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267016 Gene

Localization for ENSG00000267016 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267016 Gene

Pathways & Interactions for ENSG00000267016 Gene

PathCards logo

SuperPathways for ENSG00000267016 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267016 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000267016 Gene

Drugs & Compounds for ENSG00000267016 Gene

No Compound Related Data Available

Transcripts for ENSG00000267016 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000267016 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005115FC_9606 lncRNA 1135 2

Ensembl: ENST00000591110 (view in UCSC) ,

LNCipedia: lnc-TMC6-3:2,

URS00008BC861_9606 lncRNA 1736 3

LncBook: HSALNT0245606,

LNCipedia: lnc-TMC6-3:1,

NONCODE: NONHSAT056152.2,

URS0001BCB71A_9606 lncRNA 1733 1

LncBook: HSALNT0245606,

ENSG00000267016 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267016 Gene

No ASD Table

Relevant External Links for ENSG00000267016 Gene

GeneLoc Exon Structure for
ENSG00000267016

No data available for mRNA/cDNA for ENSG00000267016 Gene

Expression for ENSG00000267016 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000267016 Gene

genes like me logo Genes that share expression patterns with ENSG00000267016: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267016 Gene

Orthologs for ENSG00000267016 Gene

Evolution for ENSG00000267016 Gene

ENSEMBL:
Gene Tree for ENSG00000267016 (if available)
TreeFam:
Gene Tree for ENSG00000267016 (if available)

No data available for Orthologs for ENSG00000267016 Gene

Paralogs for ENSG00000267016 Gene

No data available for Paralogs for ENSG00000267016 Gene

Variants for ENSG00000267016 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267016 Gene

Disorders for ENSG00000267016 Gene

No disorders were found for ENSG00000267016 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267016 Gene

Publications for ENSG00000267016 Gene

No publications were found for ENSG00000267016 Gene.

No data available for Mastermind for ENSG00000267016 Gene

Products for ENSG00000267016 Gene

Sources for ENSG00000267016 Gene