Aliases for ENSG00000267016 Gene

Subcategory (RNA class) for ENSG00000267016 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000267016 Gene

  • Novel Transcript, Antisense To SEPT9 5
  • HSALNG0118926 169
  • NONHSAG022856 94
  • AC111170.1 5
  • Lnc-TMC6-3 170

External Ids for ENSG00000267016 Gene

Previous GeneCards Identifiers for ENSG00000267016 Gene

  • GC17M075468

Summaries for ENSG00000267016 Gene

GeneCards Summary for ENSG00000267016 Gene

ENSG00000267016 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000267016 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000267016 Gene

Genomics for ENSG00000267016 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000267016 Gene

Promoters and enhancers for ENSG00000267016 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J077470 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 750.6 -1.6 -1568 8.4 ZNF24 SMARCE1 ZNF217 TRIM22 ZNF133 JUND ETV6 MNT TEAD4 SOX6 ENSG00000267016 SRSF2 SEPTIN9 ENSG00000200651 METTL23 SNHG20 ENSG00000267546 ENSG00000267263 lnc-SEPT9-5
GH17J077478 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -7.8 -7794 3.5 HLF GLIS2 ZIC2 USF1 POLR2A RCOR1 ZFHX2 GLIS1 ZMYM3 KDM1A ENSG00000267016 lnc-SEPT9-5 SEPTIN9
GH17J077494 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -22.1 -22121 1.5 CTCF CC2D1A MAX RAD21 BCL6B GTF2F1 ELF3 AHR MLLT1 PPARG lnc-SEPT9-5 ENSG00000267016 SEPTIN9
GH17J077484 Enhancer 0.9 ENCODE dbSUPER 0.4 -12.4 -12412 0.5 ZNF785 TRIM22 SOX6 ZNF473 MLLT1 MCM2 ZNF680 CREB1 YBX1 ZNF544 SRSF2 TNRC6C SEPTIN9 ENSG00000267546 TMC8 SNHG20 METTL23 RHBDF2 MFSD11 ENSG00000267016
GH17J077489 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -17.4 -17428 1.9 SP1 RXRA SCRT2 JUND SCRT1 NR2F2 ZFHX2 RAD21 PAF1 HNF4A ENSG00000267016 lnc-SEPT9-5 SEPTIN9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000267016 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000267016 Gene

Genomic Locations for ENSG00000267016 Gene
chr17:77,469,162-77,472,770
(GRCh38/hg38)
Size:
3,609 bases
Orientation:
Minus strand
chr17:75,465,244-75,468,852
(GRCh37/hg19)
Size:
3,609 bases
Orientation:
Minus strand

Genomic View for ENSG00000267016 Gene

Genes around ENSG00000267016 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000267016 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000267016 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000267016 Gene

Proteins for ENSG00000267016 Gene

Post-translational modifications for ENSG00000267016 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000267016 Gene

Domains & Families for ENSG00000267016 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000267016 Gene

Function for ENSG00000267016 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000267016 Gene

Localization for ENSG00000267016 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000267016 Gene

Pathways & Interactions for ENSG00000267016 Gene

PathCards logo

SuperPathways for ENSG00000267016 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000267016 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000267016 Gene

Drugs & Compounds for ENSG00000267016 Gene

No Compound Related Data Available

Transcripts for ENSG00000267016 Gene

mRNA/cDNA for ENSG00000267016 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) LncBook transcripts :
(2) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000267016 Gene

No ASD Table

Relevant External Links for ENSG00000267016 Gene

GeneLoc Exon Structure for
ENSG00000267016

Expression for ENSG00000267016 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000267016 Gene

genes like me logo Genes that share expression patterns with ENSG00000267016: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000267016 Gene

Orthologs for ENSG00000267016 Gene

Evolution for ENSG00000267016 Gene

ENSEMBL:
Gene Tree for ENSG00000267016 (if available)
TreeFam:
Gene Tree for ENSG00000267016 (if available)

No data available for Orthologs for ENSG00000267016 Gene

Paralogs for ENSG00000267016 Gene

No data available for Paralogs for ENSG00000267016 Gene

Variants for ENSG00000267016 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000267016 Gene

Disorders for ENSG00000267016 Gene

No disorders were found for ENSG00000267016 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000267016 Gene

Publications for ENSG00000267016 Gene

No publications were found for ENSG00000267016 Gene.

No data available for External Links for ENSG00000267016 Gene

Products for ENSG00000267016 Gene

Sources for ENSG00000267016 Gene