Aliases for ENSG00000266908 Gene

Subcategory (RNA class) for ENSG00000266908 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000266908 Gene

  • Novel Transcript 5
  • Lnc-C20orf196-3 165
  • NONHSAG031202.2 91
  • HSALNG0128402 164
  • AL121757.2 5

External Ids for ENSG00000266908 Gene

Previous GeneCards Identifiers for ENSG00000266908 Gene

  • GC20P005481
  • GC20P005487
  • GC20P005500
  • GC20P005506
  • GC20P005521
  • GC20P005604
  • GC20P005609
  • GC20P005522
  • GC20P005541
  • GC20P005551
  • GC20P005556
  • GC20P005565
  • GC20P005571
  • GC20P005583
  • GC20P005594

Summaries for ENSG00000266908 Gene

GeneCards Summary for ENSG00000266908 Gene

ENSG00000266908 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000266908 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000266908 Gene

Genomics for ENSG00000266908 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000266908 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J005316 Promoter 0.7 EPDnew 600.7 -1.5 -1529 0.1 HNRNPL EZH2 ZBTB20 CTCF ZBTB26 ZNF335 GLIS2 ENSG00000266908 PROKR2 GPCPD1
GH20J005317 Enhancer 0.5 ENCODE 600.7 -1.3 -1288 0.1 HNRNPL CTCF EZH2 ZBTB20 RAD21 ZBTB26 ZNF335 ZNF143 GLIS2 ENSG00000266908 PROKR2 GPCPD1
GH20J005354 Enhancer 0.4 ENCODE 0.3 +36.0 36022 0.2 FOSL2 JUN JUND MAFK RNA5-8SP7 RF00002-004 piR-39858-362 ENSG00000266908 PROKR2 GPCPD1
GH20J005364 Enhancer 0.5 Ensembl 0.3 +46.5 46471 1.5 FOSL2 ELF1 SPI1 NRF1 JUND ELF3 RNA5-8SP7 piR-39858-362 RF00002-004 PROKR2 ENSG00000266908 GPCPD1
GH20J005448 Enhancer 0.6 Ensembl ENCODE 0.1 +130.5 130470 0.5 CTCF REST RAD21 SMC3 ZNF654 ZNF143 ENSG00000230563 piR-55028-006 lnc-CDS2-11 LINC00658 ENSG00000266908 PROKR2 GPCPD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266908 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000266908 Gene

Genomic Locations for ENSG00000266908 Gene
chr20:5,318,268-5,503,189
(GRCh38/hg38)
Size:
184,922 bases
Orientation:
Plus strand
chr20:5,479,762-5,483,527
(GRCh37/hg19)
Size:
3,766 bases
Orientation:
Plus strand

Genomic View for ENSG00000266908 Gene

Genes around ENSG00000266908 on UCSC Golden Path with GeneCards custom track
ENSG00000266908 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000266908 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266908 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266908 Gene

Proteins for ENSG00000266908 Gene

Post-translational modifications for ENSG00000266908 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266908 Gene

Domains & Families for ENSG00000266908 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266908 Gene

Function for ENSG00000266908 Gene

Phenotypes From GWAS Catalog for ENSG00000266908 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266908 Gene

Localization for ENSG00000266908 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266908 Gene

Pathways & Interactions for ENSG00000266908 Gene

PathCards logo

SuperPathways for ENSG00000266908 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000266908 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266908 Gene

Drugs & Compounds for ENSG00000266908 Gene

No Compound Related Data Available

Transcripts for ENSG00000266908 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000266908 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002A4528_9606 lncRNA 395 4

Ensembl: ENST00000587737 (view in UCSC) ,

LncBook: HSALNT0263855,

LNCipedia: lnc-C20orf196-3:8,

NONCODE: NONHSAT078418.2,

URS0000EF6709_9606 lncRNA 1923 1

Ensembl: ENST00000668553 (view in UCSC) ,

URS0000EF0730_9606 lncRNA 1242 1

Ensembl: ENST00000668370 (view in UCSC) ,

URS0000EEBD19_9606 lncRNA 978 1

Ensembl: ENST00000660590 (view in UCSC) ,

URS0000EEECAB_9606 lncRNA 698 1

Ensembl: ENST00000661981 (view in UCSC) ,

ENSG00000266908 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266908 Gene

No ASD Table

Relevant External Links for ENSG00000266908 Gene

GeneLoc Exon Structure for
ENSG00000266908

No data available for mRNA/cDNA for ENSG00000266908 Gene

Expression for ENSG00000266908 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266908 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000266908 Gene

This gene is overexpressed in Testis (x51.0).
genes like me logo Genes that share expression patterns with ENSG00000266908: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266908 Gene

Orthologs for ENSG00000266908 Gene

Evolution for ENSG00000266908 Gene

ENSEMBL:
Gene Tree for ENSG00000266908 (if available)
TreeFam:
Gene Tree for ENSG00000266908 (if available)

No data available for Orthologs for ENSG00000266908 Gene

Paralogs for ENSG00000266908 Gene

No data available for Paralogs for ENSG00000266908 Gene

Variants for ENSG00000266908 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266908 Gene

Disorders for ENSG00000266908 Gene

No disorders were found for ENSG00000266908 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000266908 Gene

Publications for ENSG00000266908 Gene

No publications were found for ENSG00000266908 Gene.

No data available for Mastermind for ENSG00000266908 Gene

Products for ENSG00000266908 Gene

Sources for ENSG00000266908 Gene