Aliases for ENSG00000266877 Gene

Subcategory (RNA class) for ENSG00000266877 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000266877 Gene

  • Novel Transcript 5
  • NONHSAG021446.2 91
  • Lnc-RAB11FIP4-2 165
  • HSALNG0115711 164
  • AC007923.3 5

External Ids for ENSG00000266877 Gene

Previous GeneCards Identifiers for ENSG00000266877 Gene

  • GC17P029912
  • GC17P029916
  • GC17P029920

Summaries for ENSG00000266877 Gene

GeneCards Summary for ENSG00000266877 Gene

ENSG00000266877 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000266877 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000266877 Gene

Genomics for ENSG00000266877 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000266877 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J031583 Enhancer 0.6 ENCODE dbSUPER 600.7 +1.0 986 1.2 USF1 USF2 ZBTB40 RAD51 ENSG00000266877 MIR193A RAB11FIP4 lnc-RAB11FIP4-1 lnc-COPRS-3 COPRS
GH17J031578 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.3 -2267 4.1 FOXA1 ZIC2 IKZF2 DPF2 RELB JUND CEBPB GATAD2B FOS GABPA MIR193A RAB11FIP4 EVI2A EVI2B ENSG00000266877 lnc-RAB11FIP4-1 COPRS
GH17J031592 Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +13.6 13595 7.7 HNRNPL GATAD2A ZBTB33 ATF7 FOXA1 ZIC2 RXRB IKZF2 ZNF600 ZFX lnc-COPRS-3 RAB11FIP4 MIR193A RNU6ATAC7P RNF135 CRLF3 EVI2A ENSG00000266877 lnc-COPRS-1 COPRS
GH17J031586 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.3 4349 2.4 CEBPB USF1 CEBPG ZNF335 ATF4 BCL6 RAD51 RNU6ATAC7P MIR193A UTP6 RAB11FIP4 SH3GL1P1 ENSG00000266877 lnc-COPRS-3 lnc-COPRS-1 COPRS
GH17J031577 Promoter/Enhancer 0.7 Ensembl dbSUPER 0.4 -5.3 -5261 0.2 PRDM10 MAX RF00017-2349 lnc-RAB11FIP4-1 ENSG00000266877 RAB11FIP4 COPRS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266877 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000266877 Gene

Genomic Locations for ENSG00000266877 Gene
chr17:31,583,162-31,637,543
(GRCh38/hg38)
Size:
54,382 bases
Orientation:
Plus strand
chr17:29,910,181-29,964,562
(GRCh37/hg19)
Size:
54,382 bases
Orientation:
Plus strand

Genomic View for ENSG00000266877 Gene

Genes around ENSG00000266877 on UCSC Golden Path with GeneCards custom track
ENSG00000266877 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000266877 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266877 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266877 Gene

Proteins for ENSG00000266877 Gene

Post-translational modifications for ENSG00000266877 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266877 Gene

Domains & Families for ENSG00000266877 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266877 Gene

Function for ENSG00000266877 Gene

Phenotypes From GWAS Catalog for ENSG00000266877 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266877 Gene

Localization for ENSG00000266877 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266877 Gene

Pathways & Interactions for ENSG00000266877 Gene

PathCards logo

SuperPathways for ENSG00000266877 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000266877 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266877 Gene

Drugs & Compounds for ENSG00000266877 Gene

No Compound Related Data Available

Transcripts for ENSG00000266877 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000266877 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002C106F_9606 lncRNA 568 4

Ensembl: ENST00000578650 (view in UCSC) ,

LncBook: HSALNT0239359,

LNCipedia: lnc-RAB11FIP4-2:1,

NONCODE: NONHSAT052888.2,

URS00008B5C49_9606 lncRNA 398 3

LncBook: HSALNT0239368,

LNCipedia: lnc-RAB11FIP4-2:2,

NONCODE: NONHSAT052890.2,

URS00009BF34C_9606 lncRNA 398 2

LncBook: HSALNT0239369,

NONCODE: NONHSAT175087.1,

URS0000E95682_9606 lncRNA 3955 1

LncBook: HSALNT0239366,

ENSG00000266877 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266877 Gene

No ASD Table

Relevant External Links for ENSG00000266877 Gene

GeneLoc Exon Structure for
ENSG00000266877

No data available for mRNA/cDNA for ENSG00000266877 Gene

Expression for ENSG00000266877 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266877 Gene

genes like me logo Genes that share expression patterns with ENSG00000266877: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266877 Gene

Orthologs for ENSG00000266877 Gene

Evolution for ENSG00000266877 Gene

ENSEMBL:
Gene Tree for ENSG00000266877 (if available)
TreeFam:
Gene Tree for ENSG00000266877 (if available)

No data available for Orthologs for ENSG00000266877 Gene

Paralogs for ENSG00000266877 Gene

No data available for Paralogs for ENSG00000266877 Gene

Variants for ENSG00000266877 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266877 Gene

Disorders for ENSG00000266877 Gene

No disorders were found for ENSG00000266877 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000266877 Gene

Publications for ENSG00000266877 Gene

No publications were found for ENSG00000266877 Gene.

No data available for Mastermind for ENSG00000266877 Gene

Products for ENSG00000266877 Gene

Sources for ENSG00000266877 Gene