Aliases for ENSG00000266844 Gene

Subcategory (RNA class) for ENSG00000266844 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000266844 Gene

  • Novel Transcript, Antisense To MBP 5
  • NONHSAG024213.2 91
  • HSALNG0122602 164
  • Lnc-ZNF236-1 165
  • AC093330.1 5

External Ids for ENSG00000266844 Gene

Previous GeneCards Identifiers for ENSG00000266844 Gene

  • GC18P074686

Summaries for ENSG00000266844 Gene

GeneCards Summary for ENSG00000266844 Gene

ENSG00000266844 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000266844 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000266844 Gene

Genomics for ENSG00000266844 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000266844 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J076981 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +6.9 6911 4.8 CTCF ZNF629 KDM1A BACH1 STAT3 ZNF143 RELA ZIC2 REST RAD21 LOC105372217 RNU6-346P ZNF236 ENSG00000266844 ENSG00000279811 MBP lnc-MBP-13
GH18J076976 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 +3.1 3053 2.1 POLR2A SMARCA4 RNU6-346P ZNF236-DT ZNF236 ENSG00000266844 LOC105372217 MBP
GH18J076973 Enhancer 0.6 Ensembl dbSUPER 0.7 -2.4 -2389 3.8 ZFHX2 SPI1 MAFK EGR2 ENSG00000266844 lnc-MBP-5 ZNF236 MBP
GH18J076965 Enhancer 0.9 Ensembl ENCODE 0.4 -8.2 -8189 5.4 ZNF143 IKZF2 TRIM22 RELB NONO ELF1 NBN HDGF NR2C1 EBF1 ZNF236 ENSG00000266844 lnc-MBP-5 MBP
GH18J076952 Enhancer 0.8 Ensembl ENCODE 0.4 -21.4 -21436 1.9 REST SP1 ESR1 FOXA2 GABPA ZBTB33 JUND NR2F2 RAD21 TFAP4 ZNF236 lnc-MBP-5 ENSG00000266844 MBP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266844 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000266844 Gene

Genomic Locations for ENSG00000266844 Gene
chr18:76,974,690-76,984,162
(GRCh38/hg38)
Size:
9,473 bases
Orientation:
Plus strand
chr18:74,686,646-74,696,118
(GRCh37/hg19)
Size:
9,473 bases
Orientation:
Plus strand

Genomic View for ENSG00000266844 Gene

Genes around ENSG00000266844 on UCSC Golden Path with GeneCards custom track
ENSG00000266844 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000266844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266844 Gene

Proteins for ENSG00000266844 Gene

Post-translational modifications for ENSG00000266844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266844 Gene

Domains & Families for ENSG00000266844 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266844 Gene

Function for ENSG00000266844 Gene

Phenotypes From GWAS Catalog for ENSG00000266844 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266844 Gene

Localization for ENSG00000266844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266844 Gene

Pathways & Interactions for ENSG00000266844 Gene

PathCards logo

SuperPathways for ENSG00000266844 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000266844 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266844 Gene

Drugs & Compounds for ENSG00000266844 Gene

No Compound Related Data Available

Transcripts for ENSG00000266844 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000266844 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002C018F_9606 lncRNA 812 4

Ensembl: ENST00000582546 (view in UCSC) ,

LncBook: HSALNT0253473,

LNCipedia: lnc-ZNF236-1:6,

NONCODE: NONHSAT059972.2,

URS000053EDD1_9606 lncRNA 737 4

Ensembl: ENST00000580580 (view in UCSC) ,

LncBook: HSALNT0253471,

LNCipedia: lnc-ZNF236-1:5,

NONCODE: NONHSAT059971.2,

URS00002A7913_9606 lncRNA 568 4

Ensembl: ENST00000583326 (view in UCSC) ,

LncBook: HSALNT0253460,

LNCipedia: lnc-ZNF236-1:1,

NONCODE: NONHSAT059965.2,

URS00000AE162_9606 lncRNA 440 4

Ensembl: ENST00000583889 (view in UCSC) ,

LncBook: HSALNT0253462,

LNCipedia: lnc-ZNF236-1:2,

NONCODE: NONHSAT059966.2,

URS000048D4A7_9606 lncRNA 396 4

Ensembl: ENST00000582763 (view in UCSC) ,

LncBook: HSALNT0253469,

LNCipedia: lnc-ZNF236-1:4,

NONCODE: NONHSAT059969.2,

ENSG00000266844 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266844 Gene

No ASD Table

Relevant External Links for ENSG00000266844 Gene

GeneLoc Exon Structure for
ENSG00000266844

No data available for mRNA/cDNA for ENSG00000266844 Gene

Expression for ENSG00000266844 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266844 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000266844 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x22.1), Brain - Substantia nigra (x8.0), Brain - Hypothalamus (x4.2), and Brain - Hippocampus (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000266844: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266844 Gene

Orthologs for ENSG00000266844 Gene

Evolution for ENSG00000266844 Gene

ENSEMBL:
Gene Tree for ENSG00000266844 (if available)
TreeFam:
Gene Tree for ENSG00000266844 (if available)

No data available for Orthologs for ENSG00000266844 Gene

Paralogs for ENSG00000266844 Gene

No data available for Paralogs for ENSG00000266844 Gene

Variants for ENSG00000266844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266844 Gene

Disorders for ENSG00000266844 Gene

Additional Disease Information for ENSG00000266844

No disorders were found for ENSG00000266844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000266844 Gene

Publications for ENSG00000266844 Gene

No publications were found for ENSG00000266844 Gene.

No data available for Mastermind for ENSG00000266844 Gene

Products for ENSG00000266844 Gene

Sources for ENSG00000266844 Gene