Aliases for ENSG00000266677 Gene

Subcategory (RNA class) for ENSG00000266677 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000266677 Gene

  • Novel Transcript 5
  • NONHSAG021042.2 91
  • AC087164.1 5
  • Lnc-FLII-1 165

External Ids for ENSG00000266677 Gene

Previous GeneCards Identifiers for ENSG00000266677 Gene

  • GC17M018075

Summaries for ENSG00000266677 Gene

GeneCards Summary for ENSG00000266677 Gene

ENSG00000266677 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000266677 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000266677 Gene

Genomics for ENSG00000266677 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000266677 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J018181 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.3 -327 8 CEBPG SP1 CREB1 GATAD2A ATF7 PRDM10 ZNF629 RFX1 SOX13 KDM1A ALKBH5 ENSG00000266677 lnc-FLII-3 piR-41967 MYO15A SMCR8 MIEF2 FOXO3B SHMT1 ZNF286B
GH17J018175 Enhancer 0.6 Ensembl 0.4 +8.4 8352 1.6 MGA BCOR GTF3C2 BHLHE40 ZMYM3 MYC ZNF24 MAX RAD51 KDM1A LLGL1 MYO15A ALKBH5 ENSG00000266677 LOC105371567 lnc-TOP3A-1
GH17J018172 Enhancer 0.5 Ensembl 0.4 +11.6 11552 0.8 THRA ZNF592 STAT1 NR2F1 IKZF1 ESRRA NR2C1 ZNF548 MYO15A FOXO3B DRG2 SMCR8 LLGL1 SMCR5 ENSG00000262202 ALKBH5 ENSG00000266677 LOC105371567
GH17J018180 Enhancer 0.2 Ensembl 0.4 +5.6 5552 0.4 MYO15A LLGL1 ALKBH5 ENSG00000266677 LOC105371567 lnc-TOP3A-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266677 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000266677 Gene

Genomic Locations for ENSG00000266677 Gene
chr17:18,172,479-18,184,753
(GRCh38/hg38)
Size:
12,275 bases
Orientation:
Minus strand

Genomic View for ENSG00000266677 Gene

Genes around ENSG00000266677 on UCSC Golden Path with GeneCards custom track
ENSG00000266677 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000266677 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266677 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266677 Gene

Proteins for ENSG00000266677 Gene

Post-translational modifications for ENSG00000266677 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266677 Gene

Domains & Families for ENSG00000266677 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266677 Gene

Function for ENSG00000266677 Gene

Phenotypes From GWAS Catalog for ENSG00000266677 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266677 Gene

Localization for ENSG00000266677 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266677 Gene

Pathways & Interactions for ENSG00000266677 Gene

PathCards logo

SuperPathways for ENSG00000266677 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000266677 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266677 Gene

Drugs & Compounds for ENSG00000266677 Gene

No Compound Related Data Available

Transcripts for ENSG00000266677 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000266677 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000227BD6_9606 lncRNA 2158 3

Ensembl: ENST00000583062 (view in UCSC) ,

LNCipedia: lnc-FLII-1:1,

NONCODE: NONHSAT146155.2,

URS0000334989_9606 lncRNA 513 3

Ensembl: ENST00000577847 (view in UCSC) ,

LNCipedia: lnc-FLII-1:2,

NONCODE: NONHSAT146154.2,

URS0000D5E328_9606 lncRNA 5974 1

LNCipedia: lnc-FLII-1:5,

URS0000D5C685_9606 lncRNA 2140 1

LNCipedia: lnc-FLII-1:3,

URS0000D58CBE_9606 lncRNA 581 1

LNCipedia: lnc-FLII-1:4,

ENSG00000266677 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266677 Gene

No ASD Table

Relevant External Links for ENSG00000266677 Gene

GeneLoc Exon Structure for
ENSG00000266677

No data available for mRNA/cDNA for ENSG00000266677 Gene

Expression for ENSG00000266677 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266677 Gene

genes like me logo Genes that share expression patterns with ENSG00000266677: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266677 Gene

Orthologs for ENSG00000266677 Gene

Evolution for ENSG00000266677 Gene

ENSEMBL:
Gene Tree for ENSG00000266677 (if available)
TreeFam:
Gene Tree for ENSG00000266677 (if available)

No data available for Orthologs for ENSG00000266677 Gene

Paralogs for ENSG00000266677 Gene

No data available for Paralogs for ENSG00000266677 Gene

Variants for ENSG00000266677 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266677 Gene

Disorders for ENSG00000266677 Gene

No disorders were found for ENSG00000266677 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000266677 Gene

Publications for ENSG00000266677 Gene

No publications were found for ENSG00000266677 Gene.

No data available for Mastermind for ENSG00000266677 Gene

Products for ENSG00000266677 Gene

Sources for ENSG00000266677 Gene