Aliases for ENSG00000266578 Gene

Subcategory (RNA class) for ENSG00000266578 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000266578 Gene

  • Novel Transcript 5
  • NONHSAG023226 92
  • HSALNG0119693 167
  • Lnc-MYL12B-1 168
  • AP001025.1 5

External Ids for ENSG00000266578 Gene

Summaries for ENSG00000266578 Gene

GeneCards Summary for ENSG00000266578 Gene

ENSG00000266578 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000266578 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000266578 Gene

Genomics for ENSG00000266578 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000266578 Gene

Promoters and enhancers for ENSG00000266578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J003281 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 500.7 -1.4 -1407 2.3 HNRNPK CTCF AFF1 REST RAD21 TRIM22 ZNF830 SMC3 RBM25 TRIM25 ENSG00000266578 ENSG00000265399 MYL12B LOC104968399 RPL21P127 TGIF1
GH18J003278 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -4.5 -4472 1.9 POLR2G MEF2C CTCF POLR2A MEF2B RBM22 IRF4 IKZF1 STAT5A NFATC3 LOC104968399 RPL21P127 TGIF1 LPIN2 MYOM1 ENSG00000266578
GH18J003296 Promoter/Enhancer 1.4 ENCODE CraniofacialAtlas 0.4 +13.2 13202 1.7 ZNF217 EP300 CTCF POLR2G SP1 NCOR1 RBAK ZNF639 ZNF10 ZIC2 lnc-MYOM1-10 CBX3P2 METTL4 ENSG00000266783 piR-57460-293 ENSG00000266578
GH18J003304 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +21.9 21906 2.6 JUND FOS POLR2A RUNX1 CTBP1 FOSL1 CEBPG MAX SPI1 E2F6 MYL12B TGIF1 RF00994-419 lnc-MYOM1-10 ENSG00000266578
GH18J003268 Enhancer 0.8 ENCODE dbSUPER 0.4 -15.0 -14959 2.2 CTBP1 ESRRA PBX2 ZFHX2 IKZF1 CEBPG ATF4 GATA2 TBX21 MEIS2 LOC104968399 ENSG00000265399 LPIN2 EMILIN2 MYL12B ENSG00000266578
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266578 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000266578 Gene

Genomic Locations for ENSG00000266578 Gene
chr18:3,284,120-3,330,984
(GRCh38/hg38)
Size:
46,865 bases
Orientation:
Plus strand
chr18:3,284,143-3,327,290
(GRCh37/hg19)
Size:
43,148 bases
Orientation:
Plus strand

Genomic View for ENSG00000266578 Gene

Genes around ENSG00000266578 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000266578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266578 Gene

Proteins for ENSG00000266578 Gene

Post-translational modifications for ENSG00000266578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266578 Gene

Domains & Families for ENSG00000266578 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266578 Gene

Function for ENSG00000266578 Gene

Phenotypes From GWAS Catalog for ENSG00000266578 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266578 Gene

Localization for ENSG00000266578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266578 Gene

Pathways & Interactions for ENSG00000266578 Gene

PathCards logo

SuperPathways for ENSG00000266578 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000266578 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266578 Gene

Drugs & Compounds for ENSG00000266578 Gene

No Compound Related Data Available

Transcripts for ENSG00000266578 Gene

mRNA/cDNA for ENSG00000266578 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266578 Gene

No ASD Table

Relevant External Links for ENSG00000266578 Gene

GeneLoc Exon Structure for
ENSG00000266578

Expression for ENSG00000266578 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266578 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000266578 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x4.5), Brain - Amygdala (x4.3), and Brain - Caudate (basal ganglia) (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000266578: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266578 Gene

Orthologs for ENSG00000266578 Gene

Evolution for ENSG00000266578 Gene

ENSEMBL:
Gene Tree for ENSG00000266578 (if available)
TreeFam:
Gene Tree for ENSG00000266578 (if available)

No data available for Orthologs for ENSG00000266578 Gene

Paralogs for ENSG00000266578 Gene

No data available for Paralogs for ENSG00000266578 Gene

Variants for ENSG00000266578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266578 Gene

Disorders for ENSG00000266578 Gene

No disorders were found for ENSG00000266578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000266578 Gene

Publications for ENSG00000266578 Gene

No publications were found for ENSG00000266578 Gene.

No data available for Mastermind for ENSG00000266578 Gene

Products for ENSG00000266578 Gene

Sources for ENSG00000266578 Gene