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Aliases for ENSG00000266541 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000266541 Gene

  • Novel Transcript, Antisense To PPP4R1 5
  • AP001381.1 5

External Ids for ENSG00000266541 Gene

Summaries for ENSG00000266541 Gene

GeneCards Summary for ENSG00000266541 Gene

ENSG00000266541 is an RNA Gene.

Additional gene information for ENSG00000266541 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000266541 Gene

Genomics for ENSG00000266541 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000266541 Gene

Promoters and enhancers for ENSG00000266541 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J009608 Enhancer 1.4 Ensembl ENCODE dbSUPER 5.2 +21.8 21815 2.8 ELF3 CBFA2T2 MLLT1 RERE TFE3 TRIM24 SP1 HNF1A PRDM1 ZNF384 PPP4R1-AS1 TXNDC2 PPP4R1 ENSG00000266541 GC18M009550
GH18J009574 Enhancer 1.2 Ensembl ENCODE 5.4 -12.1 -12085 2.2 ZNF652 CC2D1A ELF3 CTCF CEBPG NFIB SP1 HNF1A PPARG PRDM1 ANKRD12 ENSG00000266708 RALBP1 TXNDC2 ENSG00000266541 ENSG00000273335 PPP4R1 PIR46771 GC18M009550
GH18J009558 Enhancer 0.4 Ensembl 5.2 -29.0 -28985 0.4 ZNF316 MAFK RXRA PPP4R1 ENSG00000266541 PIR46771 GC18M009550
GH18J009561 Enhancer 0.3 Ensembl 5.2 -25.4 -25385 1.2 JUND ENSG00000266541 PIR46771 PPP4R1 GC18M009550
GH18J009563 Enhancer 0.2 Ensembl 5.2 -23.5 -23486 1.8 PPP4R1-AS1 RALBP1 ENSG00000266541 PIR46771 PPP4R1 GC18M009550
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266541 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000266541 Gene

Genomic Locations for ENSG00000266541 Gene
chr18:9,587,386-9,590,182
(GRCh38/hg38)
Size:
2,797 bases
Orientation:
Plus strand
chr18:9,587,384-9,590,180
(GRCh37/hg19)
Size:
2,797 bases
Orientation:
Plus strand

Genomic View for ENSG00000266541 Gene

Genes around ENSG00000266541 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000266541 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266541 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266541 Gene

Proteins for ENSG00000266541 Gene

Post-translational modifications for ENSG00000266541 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266541 Gene

Domains & Families for ENSG00000266541 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000266541 Gene

Function for ENSG00000266541 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266541 Gene

Localization for ENSG00000266541 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266541 Gene

Pathways & Interactions for ENSG00000266541 Gene

PathCards logo

SuperPathways for ENSG00000266541 Gene

No Data Available

Interacting Proteins for ENSG00000266541 Gene

Gene Ontology (GO) - Biological Process for ENSG00000266541 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000266541 Gene

Drugs & Compounds for ENSG00000266541 Gene

No Compound Related Data Available

Transcripts for ENSG00000266541 Gene

mRNA/cDNA for ENSG00000266541 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266541 Gene

No ASD Table

Relevant External Links for ENSG00000266541 Gene

GeneLoc Exon Structure for
ENSG00000266541

Expression for ENSG00000266541 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000266541 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000266541 Gene

This gene is overexpressed in Whole Blood (x6.4).
genes like me logo Genes that share expression patterns with ENSG00000266541: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266541 Gene

Orthologs for ENSG00000266541 Gene

Evolution for ENSG00000266541 Gene

ENSEMBL:
Gene Tree for ENSG00000266541 (if available)
TreeFam:
Gene Tree for ENSG00000266541 (if available)

No data available for Orthologs for ENSG00000266541 Gene

Paralogs for ENSG00000266541 Gene

No data available for Paralogs for ENSG00000266541 Gene

Variants for ENSG00000266541 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266541 Gene

Disorders for ENSG00000266541 Gene

No disorders were found for ENSG00000266541 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000266541 Gene

Publications for ENSG00000266541 Gene

No publications were found for ENSG00000266541 Gene.

No data available for External Links for ENSG00000266541 Gene

Products for ENSG00000266541 Gene

Sources for ENSG00000266541 Gene

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