Aliases for ENSG00000266521 Gene

Subcategory (RNA class) for ENSG00000266521 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000266521 Gene

  • Novel Transcript 5
  • NONHSAG023634.2 91
  • Lnc-B4GALT6-2 165
  • HSALNG0120733 164
  • AC021549.2 5

External Ids for ENSG00000266521 Gene

Previous GeneCards Identifiers for ENSG00000266521 Gene

  • GC18M029076

Summaries for ENSG00000266521 Gene

GeneCards Summary for ENSG00000266521 Gene

ENSG00000266521 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000266521 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000266521 Gene

Genomics for ENSG00000266521 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000266521 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J031497 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 639.1 -1.8 -1826 3.6 RFX1 IKZF1 ZNF692 POLR2A BACH1 LARP7 STAT3 PRDM1 ZSCAN4 RBFOX2 ENSG00000266521 DSG2 piR-45035-096 TTR
GH18J031485 Enhancer 1.4 VISTA Ensembl ENCODE dbSUPER 43.6 +8.3 8326 6.7 IKZF1 BACH1 PRDM1 RELA PKNOX1 IKZF2 TRIM22 EED DPF2 RELB ENSG00000266521 DSG1-AS1 DSG2 DSG3
GH18J031510 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 21.6 -15.8 -15806 8.8 GATAD2A CTCF ATF7 PRDM10 ZNF629 TFE3 SOX13 NFKBIZ ZNF692 RCOR2 ENSG00000266521 DSG2 RNU6-1050P B4GALT6 DSC3 DSG1 DSC2 piR-45035-096 DSG2-AS1 TTR
GH18J031504 Enhancer 0.2 Ensembl 34.4 -7.7 -7706 1.4 ENSG00000266521 piR-45035-096 DSG2 DSG2-AS1 TTR
GH18J031506 Enhancer 0.2 Ensembl 34.1 -8.9 -8906 0.2 ENSG00000266521 piR-45035-096 DSG2 DSG2-AS1 TTR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266521 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000266521 Gene

Genomic Locations for ENSG00000266521 Gene
chr18:31,485,394-31,497,195
(GRCh38/hg38)
Size:
11,802 bases
Orientation:
Minus strand
chr18:29,076,608-29,077,158
(GRCh37/hg19)
Size:
551 bases
Orientation:
Minus strand

Genomic View for ENSG00000266521 Gene

Genes around ENSG00000266521 on UCSC Golden Path with GeneCards custom track
ENSG00000266521 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000266521 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266521 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000266521 Gene

Proteins for ENSG00000266521 Gene

Post-translational modifications for ENSG00000266521 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266521 Gene

Domains & Families for ENSG00000266521 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266521 Gene

Function for ENSG00000266521 Gene

Phenotypes From GWAS Catalog for ENSG00000266521 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266521 Gene

Localization for ENSG00000266521 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266521 Gene

Pathways & Interactions for ENSG00000266521 Gene

PathCards logo

SuperPathways for ENSG00000266521 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000266521 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266521 Gene

Drugs & Compounds for ENSG00000266521 Gene

No Compound Related Data Available

Transcripts for ENSG00000266521 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000266521 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002A5F38_9606 lncRNA 433 3

Ensembl: ENST00000580937 (view in UCSC) ,

LNCipedia: lnc-B4GALT6-2:1,

NONCODE: NONHSAT058821.2,

URS00008BB487_9606 lncRNA 417 3

LncBook: HSALNT0249605,

LNCipedia: lnc-B4GALT6-2:2,

NONCODE: NONHSAT058820.2,

ENSG00000266521 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266521 Gene

No ASD Table

Relevant External Links for ENSG00000266521 Gene

GeneLoc Exon Structure for
ENSG00000266521

No data available for mRNA/cDNA for ENSG00000266521 Gene

Expression for ENSG00000266521 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266521 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000266521 Gene

This gene is overexpressed in Thyroid (x6.3), Minor Salivary Gland (x4.5), and Esophagus - Mucosa (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000266521: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266521 Gene

Orthologs for ENSG00000266521 Gene

Evolution for ENSG00000266521 Gene

ENSEMBL:
Gene Tree for ENSG00000266521 (if available)
TreeFam:
Gene Tree for ENSG00000266521 (if available)

No data available for Orthologs for ENSG00000266521 Gene

Paralogs for ENSG00000266521 Gene

No data available for Paralogs for ENSG00000266521 Gene

Variants for ENSG00000266521 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266521 Gene

Disorders for ENSG00000266521 Gene

Additional Disease Information for ENSG00000266521

No disorders were found for ENSG00000266521 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000266521 Gene

Publications for ENSG00000266521 Gene

No publications were found for ENSG00000266521 Gene.

No data available for Mastermind for ENSG00000266521 Gene

Products for ENSG00000266521 Gene

Sources for ENSG00000266521 Gene