ENSG00000266446 Gene (RNA Gene)

 

GC09P021995
GIFtS:
6

Aliases for ENSG00000266446 Gene

Subcategory (RNA class) for ENSG00000266446 Gene

lncRNA

Number of RNA Genes sources:

4 / 14

Aliases for ENSG00000266446 Gene

  • Novel Transcript, Sense Intronic CDKN2B-AS1 5
  • HSALNG0070397 167
  • NONHSAG051899 92
  • NONHSAG051900 92
  • AL449423.1 5
  • CDKN2B-AS1 168

External Ids for ENSG00000266446 Gene

Summaries for ENSG00000266446 Gene

GeneCards Summary for ENSG00000266446 Gene

ENSG00000266446 is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for ENSG00000266446 Gene

  • CDKN2B antisense RNA 1 convserved region 2
  • CDKN2B antisense RNA 1 convserved region 3

Additional gene information for ENSG00000266446 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000266446 Gene

Genomics for ENSG00000266446 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000266446 Gene

Promoters and enhancers for ENSG00000266446 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH09J021989 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.3 -2305 7.2 ZBTB40 ZSCAN5C SIN3A USF1 ZFX ZNF10 ZIC2 ZBTB10 ZNF623 ZNF423 CDKN2A CDKN2B-AS1 lnc-CDKN2B-2-001 lnc-CDKN2B-2-002 CDKN2A-DT CDKN2B MTAP ENSG00000266446 piR-53864 ENSG00000264545
GH09J022005 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +11.7 11719 6 CTCF SIN3A POLR2G USF1 TEAD4 ZNF639 ZIC2 ZBTB10 ZNF423 ZBTB26 CDKN2B ENSG00000266446 CDKN2B-AS1 ENSG00000264545
GH09J021997 Enhancer 0.4 Ensembl 0.7 +2.6 2619 1 ZNF10 ZBTB48 ZNF664 ZNF596 EZH2 CDKN2B CDKN2B-AS1 ENSG00000266446 ENSG00000264545
GH09J022000 Enhancer 0.3 dbSUPER 0.4 +6.2 6241 1.9 ZNF18 EZH2 CDKN2B CDKN2B-AS1 ENSG00000266446 ENSG00000264545
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000266446 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000266446 Gene

Genomic Locations for ENSG00000266446 Gene
chr9:21,995,482-21,996,013
(GRCh38/hg38)
Size:
532 bases
Orientation:
Plus strand
chr9:21,995,481-21,996,012
(GRCh37/hg19)
Size:
532 bases
Orientation:
Plus strand

Genomic View for ENSG00000266446 Gene

Genes around ENSG00000266446 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000266446 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000266446 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000266446 Gene

Proteins for ENSG00000266446 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000266446 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000266446 Gene

Domains & Families for ENSG00000266446 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000266446 Gene

Function for ENSG00000266446 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000266446 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000266446 Gene

Localization for ENSG00000266446 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000266446 Gene

Pathways & Interactions for ENSG00000266446 Gene

PathCards logo

SuperPathways for ENSG00000266446 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000266446 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000266446 Gene

Drugs & Compounds for ENSG00000266446 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000266446 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000266446 Gene

55 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
9 NONCODE transcripts :
6 ENA transcripts :
16 LncBook transcripts :
48 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000266446 Gene

No ASD Table

Relevant External Links for ENSG00000266446 Gene

GeneLoc Exon Structure for
ENSG00000266446

Expression for ENSG00000266446 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000266446 Gene

mRNA expression in normal human tissues for ENSG00000266446 Gene
mRNA expression by GTEx for ENSG00000266446 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000266446 Gene

This gene is overexpressed in Testis (x38.5).
genes like me logo Genes that share expression patterns with ENSG00000266446: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000266446 Gene

Orthologs for ENSG00000266446 Gene

Evolution for ENSG00000266446 Gene

ENSEMBL:
Gene Tree for ENSG00000266446 (if available)
TreeFam:
Gene Tree for ENSG00000266446 (if available)

No data available for Orthologs for ENSG00000266446 Gene

Paralogs for ENSG00000266446 Gene

No data available for Paralogs for ENSG00000266446 Gene

Variants for ENSG00000266446 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000266446 Gene

Disorders for ENSG00000266446 Gene

No disorders were found for ENSG00000266446 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000266446 Gene

Publications for ENSG00000266446 Gene

No publications were found for ENSG00000266446 Gene.

No data available for Mastermind for ENSG00000266446 Gene

Products for ENSG00000266446 Gene

Sources for ENSG00000266446 Gene