Aliases for ENSG00000265840 Gene

Subcategory (RNA class) for ENSG00000265840 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000265840 Gene

  • Novel Transcript, Antisense To TRAF4 5
  • Lnc-FAM222B-1 170
  • NONHSAG021335 94
  • HSALNG0115514 169
  • AC010761.6 5

External Ids for ENSG00000265840 Gene

Previous GeneCards Identifiers for ENSG00000265840 Gene

  • GC17M027076

Summaries for ENSG00000265840 Gene

GeneCards Summary for ENSG00000265840 Gene

ENSG00000265840 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000265840 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000265840 Gene

Genomics for ENSG00000265840 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000265840 Gene

Promoters and enhancers for ENSG00000265840 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028751 Enhancer 0.3 Ensembl 750.6 -1.4 -1422 0.2 POLR2A ENSG00000265840 TRAF4 piR-60051-041 RF00017-2319
GH17J028737 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +5.9 5859 13.9 ZNF785 SIN3A ZNF24 SP1 ZBTB40 CTCF SREBF1 FOXA1 ZBTB6 MLX TRAF4 ENSG00000265073 piR-43105-269 ENSG00000264577 NUFIP2 ENSG00000265205 SUPT6H ENSG00000264290 RPL23A ENSG00000265908
GH17J028752 Enhancer 0.5 Ensembl 0.6 -3.2 -3174 0.5 PRDM10 POLR2A ZNF18 SUPT5H CEBPB TRAF4 ENSG00000265840 piR-60051-041 RF00017-2319
GH17J028757 Enhancer 0.5 Ensembl dbSUPER 0.4 -6.5 -6522 0.4 POLR2A SCRT1 piR-60051-041 ENSG00000265840 RF00017-2319 FAM222B
GH17J028756 Enhancer 0.4 Ensembl dbSUPER 0.4 -6.0 -6022 0.2 POLR2A piR-60051-041 ENSG00000265840 RF00017-2319 FAM222B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000265840 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000265840 Gene

Genomic Locations for ENSG00000265840 Gene
chr17:28,749,731-28,750,079
(GRCh38/hg38)
Size:
349 bases
Orientation:
Minus strand
chr17:27,076,749-27,077,097
(GRCh37/hg19)
Size:
349 bases
Orientation:
Minus strand

Genomic View for ENSG00000265840 Gene

Genes around ENSG00000265840 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000265840 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000265840 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000265840 Gene

Proteins for ENSG00000265840 Gene

Post-translational modifications for ENSG00000265840 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000265840 Gene

Domains & Families for ENSG00000265840 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000265840 Gene

Function for ENSG00000265840 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000265840 Gene

Localization for ENSG00000265840 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000265840 Gene

Pathways & Interactions for ENSG00000265840 Gene

PathCards logo

SuperPathways for ENSG00000265840 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000265840 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000265840 Gene

Drugs & Compounds for ENSG00000265840 Gene

No Compound Related Data Available

Transcripts for ENSG00000265840 Gene

mRNA/cDNA for ENSG00000265840 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000265840 Gene

No ASD Table

Relevant External Links for ENSG00000265840 Gene

GeneLoc Exon Structure for
ENSG00000265840

Expression for ENSG00000265840 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000265840 Gene

genes like me logo Genes that share expression patterns with ENSG00000265840: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000265840 Gene

Orthologs for ENSG00000265840 Gene

Evolution for ENSG00000265840 Gene

ENSEMBL:
Gene Tree for ENSG00000265840 (if available)
TreeFam:
Gene Tree for ENSG00000265840 (if available)

No data available for Orthologs for ENSG00000265840 Gene

Paralogs for ENSG00000265840 Gene

No data available for Paralogs for ENSG00000265840 Gene

Variants for ENSG00000265840 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000265840 Gene

Disorders for ENSG00000265840 Gene

No disorders were found for ENSG00000265840 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000265840 Gene

Publications for ENSG00000265840 Gene

No publications were found for ENSG00000265840 Gene.

No data available for External Links for ENSG00000265840 Gene

Products for ENSG00000265840 Gene

Sources for ENSG00000265840 Gene