Aliases for ENSG00000265800 Gene

Subcategory (RNA class) for ENSG00000265800 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000265800 Gene

  • Novel Transcript, Sense Intronic To HN1 5
  • NONHSAG022732.2 91
  • HSALNG0118713 164
  • AC022211.4 5
  • Lnc-NT5C-1 165

External Ids for ENSG00000265800 Gene

Previous GeneCards Identifiers for ENSG00000265800 Gene

  • GC17M073135

Summaries for ENSG00000265800 Gene

GeneCards Summary for ENSG00000265800 Gene

ENSG00000265800 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000265800 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000265800 Gene

Genomics for ENSG00000265800 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000265800 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J075140 Enhancer 0.6 Ensembl ENCODE 600.7 +0.2 150 1.6 RUNX3 ELF1 POLR2A ZNF121 ENSG00000265800 NUP85 JPT1 ATP5PD KCTD2 TMEM94 NT5C lnc-NT5C-3 LOC107985034
GH17J074451 Promoter/Enhancer 1.6 ENCODE CraniofacialAtlas dbSUPER 4.8 +687.4 687432 4.1 HNRNPL PRDM10 REST ZNF629 TFE3 LEF1 IKZF1 KDM1A ZNF692 JUND GPR142 CD300E CD300LD GPRC5C ENSG00000265800 CD300A RF00017-2539
GH17J074459 Enhancer 0.9 CraniofacialAtlas dbSUPER 4.8 +684.0 683988 0.2 PATZ1 CTCF RAD21 ZNF766 RELB MTA3 CTBP1 RNF2 ZBTB17 CBX2 GPR142 ENSG00000265800 CD300A GPRC5C RF00017-2539
GH17J074458 Promoter/Enhancer 0.7 Ensembl dbSUPER 4.9 +684.5 684549 0.8 CBX2 ZNF335 ZFP64 GPR142 ENSG00000265800 CD300A GPRC5C RF00017-2539
GH17J075137 Enhancer 0.4 FANTOM5 0.7 +3.8 3806 0.3 POLR2A NFIC NUP85 JPT1 ATP5PD KCTD2 CDR2L MRPL58 ENSG00000265800 NT5C LOC107985034 lnc-NT5C-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000265800 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000265800 Gene

Genomic Locations for ENSG00000265800 Gene
chr17:75,138,416-75,141,350
(GRCh38/hg38)
Size:
2,935 bases
Orientation:
Minus strand
chr17:73,134,511-73,137,445
(GRCh37/hg19)
Size:
2,935 bases
Orientation:
Minus strand

Genomic View for ENSG00000265800 Gene

Genes around ENSG00000265800 on UCSC Golden Path with GeneCards custom track
ENSG00000265800 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000265800 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000265800 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000265800 Gene

Proteins for ENSG00000265800 Gene

Post-translational modifications for ENSG00000265800 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000265800 Gene

Domains & Families for ENSG00000265800 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000265800 Gene

Function for ENSG00000265800 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000265800 Gene

Localization for ENSG00000265800 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000265800 Gene

Pathways & Interactions for ENSG00000265800 Gene

PathCards logo

SuperPathways for ENSG00000265800 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000265800 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000265800 Gene

Drugs & Compounds for ENSG00000265800 Gene

No Compound Related Data Available

Transcripts for ENSG00000265800 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000265800 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000028538E_9606 lncRNA 400 4

Ensembl: ENST00000584339 (view in UCSC) ,

LncBook: HSALNT0245233,

LNCipedia: lnc-NT5C-1:1,

NONCODE: NONHSAT055861.2,

ENSG00000265800 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000265800 Gene

No ASD Table

Relevant External Links for ENSG00000265800 Gene

GeneLoc Exon Structure for
ENSG00000265800

No data available for mRNA/cDNA for ENSG00000265800 Gene

Expression for ENSG00000265800 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000265800 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000265800 Gene

This gene is overexpressed in Whole Blood (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000265800: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000265800 Gene

Orthologs for ENSG00000265800 Gene

Evolution for ENSG00000265800 Gene

ENSEMBL:
Gene Tree for ENSG00000265800 (if available)
TreeFam:
Gene Tree for ENSG00000265800 (if available)

No data available for Orthologs for ENSG00000265800 Gene

Paralogs for ENSG00000265800 Gene

No data available for Paralogs for ENSG00000265800 Gene

Variants for ENSG00000265800 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000265800 Gene

Disorders for ENSG00000265800 Gene

No disorders were found for ENSG00000265800 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000265800 Gene

Publications for ENSG00000265800 Gene

No publications were found for ENSG00000265800 Gene.

No data available for Mastermind for ENSG00000265800 Gene

Products for ENSG00000265800 Gene

Sources for ENSG00000265800 Gene