Aliases for ENSG00000265477 Gene

Subcategory (RNA class) for ENSG00000265477 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000265477 Gene

  • Novel Transcript 5
  • NONHSAG023158.2 91
  • HSALNG0119550 164
  • Lnc-THOC1-1 165
  • AP000915.2 5

External Ids for ENSG00000265477 Gene

Summaries for ENSG00000265477 Gene

GeneCards Summary for ENSG00000265477 Gene

ENSG00000265477 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000265477 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000265477 Gene

Genomics for ENSG00000265477 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000265477 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J000423 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.1 -85 2.2 NR2C2 NR2F1 ZNF584 ENSG00000265477 COLEC12 piR-31199-146 THOC1
GH18J000420 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +3.3 3315 2.6 JUND FOS MYNN FOSL1 GATA3 PRDM4 FOSL2 PRDM6 JUN TEAD4 COLEC12 ENSG00000265477 piR-50437-287 THOC1
GH18J000427 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -2.7 -2708 0.6 RFX1 JUND NFE2 ZNF316 MAFF MAFG ZFHX2 MAFK ZMYM3 BACH1 ENSG00000265477 piR-31199-146 COLEC12 THOC1
GH18J000412 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +9.2 9215 6 ZSCAN4 PKNOX1 REST ZNF740 SOX6 HMBOX1 JUND CEBPB NFE2 ZNF316 piR-50437-287 COLEC12 THOC1 CLUL1 USP14 ENSG00000265477
GH18J000433 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -9.3 -9345 3.9 PRDM10 ZNF629 IKZF1 PRDM1 FOXJ2 EP300 CEBPB CTBP1 NR2C2 ZNF318 piR-31199-146 ENSG00000265477 COLEC12 THOC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000265477 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000265477 Gene

Genomic Locations for ENSG00000265477 Gene
chr18:423,744-424,416
(GRCh38/hg38)
Size:
673 bases
Orientation:
Minus strand
chr18:423,744-424,416
(GRCh37/hg19)
Size:
673 bases
Orientation:
Minus strand

Genomic View for ENSG00000265477 Gene

Genes around ENSG00000265477 on UCSC Golden Path with GeneCards custom track
ENSG00000265477 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000265477 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000265477 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000265477 Gene

Proteins for ENSG00000265477 Gene

Post-translational modifications for ENSG00000265477 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000265477 Gene

Domains & Families for ENSG00000265477 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000265477 Gene

Function for ENSG00000265477 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000265477 Gene

Localization for ENSG00000265477 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000265477 Gene

Pathways & Interactions for ENSG00000265477 Gene

PathCards logo

SuperPathways for ENSG00000265477 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000265477 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000265477 Gene

Drugs & Compounds for ENSG00000265477 Gene

No Compound Related Data Available

Transcripts for ENSG00000265477 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000265477 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000185D3C_9606 lncRNA 454 4

Ensembl: ENST00000582120 (view in UCSC) ,

LncBook: HSALNT0246742,

LNCipedia: lnc-THOC1-1:1,

NONCODE: NONHSAT056840.2,

ENSG00000265477 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000265477 Gene

No ASD Table

Relevant External Links for ENSG00000265477 Gene

GeneLoc Exon Structure for
ENSG00000265477

No data available for mRNA/cDNA for ENSG00000265477 Gene

Expression for ENSG00000265477 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000265477 Gene

genes like me logo Genes that share expression patterns with ENSG00000265477: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000265477 Gene

Orthologs for ENSG00000265477 Gene

Evolution for ENSG00000265477 Gene

ENSEMBL:
Gene Tree for ENSG00000265477 (if available)
TreeFam:
Gene Tree for ENSG00000265477 (if available)

No data available for Orthologs for ENSG00000265477 Gene

Paralogs for ENSG00000265477 Gene

No data available for Paralogs for ENSG00000265477 Gene

Variants for ENSG00000265477 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000265477 Gene

Disorders for ENSG00000265477 Gene

Additional Disease Information for ENSG00000265477

No disorders were found for ENSG00000265477 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000265477 Gene

Publications for ENSG00000265477 Gene

No publications were found for ENSG00000265477 Gene.

No data available for Mastermind for ENSG00000265477 Gene

Products for ENSG00000265477 Gene

Sources for ENSG00000265477 Gene