Aliases for ENSG00000265474 Gene

Subcategory (RNA class) for ENSG00000265474 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000265474 Gene

  • Novel Transcript, Antisense To TRAF4 5
  • NONHSAG021333 94
  • HSALNG0115513 169
  • Lnc-FAM222B-3 170
  • AC010761.5 5

External Ids for ENSG00000265474 Gene

Previous GeneCards Identifiers for ENSG00000265474 Gene

  • GC17M027072

Summaries for ENSG00000265474 Gene

GeneCards Summary for ENSG00000265474 Gene

ENSG00000265474 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000265474 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000265474 Gene

Genomics for ENSG00000265474 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000265474 Gene

Promoters and enhancers for ENSG00000265474 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J029290 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.2 -545.5 -545474 5.1 ZNF785 SIN3A SP1 ZBTB40 CTCF ZBTB6 FOXA1 MLX SMARCE1 RBPJ NUFIP2 lnc-CRYBA1-4 PHF12 LOC101927018 ENSG00000265908 ENSG00000264577 SUPT6H SDF2 ANKRD13B ENSG00000264647
GH17J028715 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.5 +24.7 24728 14.4 PPP1R10 ZNF785 SIN3A ZNF24 SP1 ZBTB40 CTCF SREBF1 SIX5 ZBTB6 ENSG00000264577 RPL23A NEK8 RAB34 SNORD42A SNORD4A SNORD4B X96641 piR-31970 TLCD1
GH17J028333 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.2 +410.8 410786 5.9 FOXK2 SIN3A ZBTB40 SIX5 ZBTB6 FOXA1 RBPJ POLR2A ATF1 CREB1 IFT20 TNFAIP1 lnc-IFT20-5 ENSG00000264577 SUPT6H NUFIP2 ITM2BP1 LOC101927018 ENSG00000265908 RPL23A
GH17J028403 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.2 +341.2 341231 5 POLR2A NR2F6 HLF L3MBTL2 ZNF121 MNT ZNF652 NKRF ZFX SP1 ENSG00000265254 SLC46A1 lnc-VTN-3 SUPT6H NUFIP2 NEK8 ENSG00000264577 ENSG00000265474 POLDIP2 ITM2BP1
GH17J029175 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.6 -431.0 -430965 5.7 SIN3A ZNF24 ZBTB40 CTCF SREBF1 ZBTB6 MLX RBPJ SMARCE1 POLR2A MYO18A ENSG00000264577 ENSG00000265205 ENSG00000264290 ENSG00000265908 NUFIP2 ENSG00000264044 RPL23A SDF2 LOC101927018
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000265474 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000265474 Gene

Genomic Locations for ENSG00000265474 Gene
chr17:28,745,569-28,747,652
(GRCh38/hg38)
Size:
2,084 bases
Orientation:
Minus strand
chr17:27,072,587-27,074,670
(GRCh37/hg19)
Size:
2,084 bases
Orientation:
Minus strand

Genomic View for ENSG00000265474 Gene

Genes around ENSG00000265474 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000265474 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000265474 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000265474 Gene

Proteins for ENSG00000265474 Gene

Post-translational modifications for ENSG00000265474 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000265474 Gene

Domains & Families for ENSG00000265474 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000265474 Gene

Function for ENSG00000265474 Gene

Phenotypes From GWAS Catalog for ENSG00000265474 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000265474 Gene

Localization for ENSG00000265474 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000265474 Gene

Pathways & Interactions for ENSG00000265474 Gene

PathCards logo

SuperPathways for ENSG00000265474 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000265474 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000265474 Gene

Drugs & Compounds for ENSG00000265474 Gene

No Compound Related Data Available

Transcripts for ENSG00000265474 Gene

mRNA/cDNA for ENSG00000265474 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) NONCODE transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000265474 Gene

No ASD Table

Relevant External Links for ENSG00000265474 Gene

GeneLoc Exon Structure for
ENSG00000265474

Expression for ENSG00000265474 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000265474 Gene

genes like me logo Genes that share expression patterns with ENSG00000265474: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000265474 Gene

Orthologs for ENSG00000265474 Gene

Evolution for ENSG00000265474 Gene

ENSEMBL:
Gene Tree for ENSG00000265474 (if available)
TreeFam:
Gene Tree for ENSG00000265474 (if available)

No data available for Orthologs for ENSG00000265474 Gene

Paralogs for ENSG00000265474 Gene

No data available for Paralogs for ENSG00000265474 Gene

Variants for ENSG00000265474 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000265474 Gene

Disorders for ENSG00000265474 Gene

No disorders were found for ENSG00000265474 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000265474 Gene

Publications for ENSG00000265474 Gene

No publications were found for ENSG00000265474 Gene.

No data available for External Links for ENSG00000265474 Gene

Products for ENSG00000265474 Gene

Sources for ENSG00000265474 Gene