Aliases for ENSG00000264860 Gene

Subcategory (RNA class) for ENSG00000264860 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000264860 Gene

  • Novel Transcript 5
  • Lnc-SSTR2-1 165
  • AC097641.1 5

External Ids for ENSG00000264860 Gene

Previous GeneCards Identifiers for ENSG00000264860 Gene

  • GC17P071162

Summaries for ENSG00000264860 Gene

GeneCards Summary for ENSG00000264860 Gene

ENSG00000264860 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000264860 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000264860 Gene

Genomics for ENSG00000264860 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000264860 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J073166 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 +0.7 749 2.7 HNRNPL ZNF629 FOXA1 RELA ZIC2 ZSCAN4 POLR2A PATZ1 TCF12 IKZF2 ENSG00000264860 SSTR2 lnc-SSTR2-2 COG1
GH17J073164 Enhancer 0.6 FANTOM5 600.7 -0.7 -692 0.1 ZIC2 ZSCAN4 IKZF2 PKNOX1 DPF2 TCF12 NBN POLR2A RB1 ATF2 SSTR2 ENSG00000264860 POLR3KP2 lnc-FAM104A-3 SLC39A11
GH17J073163 Enhancer 0.6 Ensembl 600.7 -1.3 -1276 0.6 ZSCAN4 IKZF2 ZNF341 DPF2 NBN STAT1 ATF2 NFATC1 MTA2 TARDBP ENSG00000264860 POLR3KP2 SSTR2 lnc-FAM104A-3 SLC39A11
GH17J073191 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +28.5 28453 4.1 CREB1 GATAD2A CTCF PRDM10 ZNF629 TFE3 ZNF512 SIX5 IKZF1 NFKBIZ COG1 SLC39A11 C17orf80 SSTR2 FAM104A CDC42EP4 ENSG00000277728 ENSG00000264860
GH17J073182 Enhancer 0.9 Ensembl ENCODE 0.4 +18.9 18924 3 IKZF1 CEBPA SOX13 ZNF140 TCF7 ZNF266 ZNF623 ZBTB11 NR2F2 BCOR C17orf80 COG1 FAM104A CDC42EP4 SLC39A11 lnc-FAM104A-2 ENSG00000264860 SSTR2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000264860 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000264860 Gene

Genomic Locations for ENSG00000264860 Gene
chr17:73,164,977-73,196,593
(GRCh38/hg38)
Size:
31,617 bases
Orientation:
Plus strand
chr17:71,161,116-71,192,732
(GRCh37/hg19)
Size:
31,617 bases
Orientation:
Plus strand

Genomic View for ENSG00000264860 Gene

Genes around ENSG00000264860 on UCSC Golden Path with GeneCards custom track
ENSG00000264860 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000264860 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000264860 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000264860 Gene

Proteins for ENSG00000264860 Gene

Post-translational modifications for ENSG00000264860 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000264860 Gene

Domains & Families for ENSG00000264860 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000264860 Gene

Function for ENSG00000264860 Gene

Phenotypes From GWAS Catalog for ENSG00000264860 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000264860 Gene

Localization for ENSG00000264860 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000264860 Gene

Pathways & Interactions for ENSG00000264860 Gene

PathCards logo

SuperPathways for ENSG00000264860 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000264860 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000264860 Gene

Drugs & Compounds for ENSG00000264860 Gene

No Compound Related Data Available

Transcripts for ENSG00000264860 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000264860 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EBDFAF_9606 lncRNA 588 1

Ensembl: ENST00000580671 (view in UCSC) ,

URS00008B734A_9606 lncRNA 530 1

LNCipedia: lnc-SSTR2-1:2,

ENSG00000264860 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000264860 Gene

No ASD Table

Relevant External Links for ENSG00000264860 Gene

GeneLoc Exon Structure for
ENSG00000264860

No data available for mRNA/cDNA for ENSG00000264860 Gene

Expression for ENSG00000264860 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000264860 Gene

genes like me logo Genes that share expression patterns with ENSG00000264860: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000264860 Gene

Orthologs for ENSG00000264860 Gene

Evolution for ENSG00000264860 Gene

ENSEMBL:
Gene Tree for ENSG00000264860 (if available)
TreeFam:
Gene Tree for ENSG00000264860 (if available)

No data available for Orthologs for ENSG00000264860 Gene

Paralogs for ENSG00000264860 Gene

No data available for Paralogs for ENSG00000264860 Gene

Variants for ENSG00000264860 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000264860 Gene

Disorders for ENSG00000264860 Gene

Additional Disease Information for ENSG00000264860

No disorders were found for ENSG00000264860 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000264860 Gene

Publications for ENSG00000264860 Gene

No publications were found for ENSG00000264860 Gene.

No data available for Mastermind for ENSG00000264860 Gene

Products for ENSG00000264860 Gene

Sources for ENSG00000264860 Gene