Aliases for ENSG00000264578 Gene

Subcategory (RNA class) for ENSG00000264578 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000264578 Gene

  • Novel Transcript, Antisense To AGPAT6 5
  • NONHSAG050078 92
  • Lnc-NKX6-3-1 168
  • AC009630.3 5

External Ids for ENSG00000264578 Gene

Previous GeneCards Identifiers for ENSG00000264578 Gene

  • GC08M041467

Summaries for ENSG00000264578 Gene

GeneCards Summary for ENSG00000264578 Gene

ENSG00000264578 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000264578 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000264578 Gene

Genomics for ENSG00000264578 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000264578 Gene

Promoters and enhancers for ENSG00000264578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J041621 Enhancer 1 Ensembl ENCODE 500.7 -1.6 -1634 2.9 ZBTB40 TCF7 MEF2C RCOR1 CTBP1 BCL11A TCF12 USF2 POLR2A ZNF207 ENSG00000264578 piR-52435 NKX6-3 GPAT4 ENSG00000253389 piR-54764-602 RF00017-6993
GH08J041603 Enhancer 1.1 Ensembl ENCODE 0.4 +14.7 14720 8.4 EP300 USF1 ZBTB5 ZIC2 KDM6A AFF1 REST CUX1 ZBTB25 USF2 NKX6-3 GPAT4 ENSG00000253174 GINS4 ENSG00000253133 RF00017-6991 piR-49834-002 ENSG00000264578
GH08J041612 Enhancer 0.8 ENCODE 0.4 +8.6 8605 1.2 CTCF REST MYC RAD21 TRIM22 SMC3 NR3C1 ZNF205 NBN ZFHX2 RF00017-6993 NKX6-3 ENSG00000253174 GINS4 ENSG00000253133 GPAT4 ENSG00000253389 piR-49834-002 ENSG00000264578
GH08J041617 Enhancer 0.4 ENCODE 0.7 +3.7 3695 0.7 CEBPB CEBPG FOXA1 CEBPA GPAT4 ENSG00000253174 GINS4 ENSG00000253133 NKX6-3 ENSG00000264578 RF00017-6993
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000264578 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000264578 Gene

Genomic Locations for ENSG00000264578 Gene
chr8:41,609,692-41,621,502
(GRCh38/hg38)
Size:
11,811 bases
Orientation:
Minus strand
chr8:41,467,211-41,479,021
(GRCh37/hg19)
Size:
11,811 bases
Orientation:
Minus strand

Genomic View for ENSG00000264578 Gene

Genes around ENSG00000264578 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000264578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000264578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000264578 Gene

Proteins for ENSG00000264578 Gene

Post-translational modifications for ENSG00000264578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000264578 Gene

Domains & Families for ENSG00000264578 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000264578 Gene

Function for ENSG00000264578 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000264578 Gene

Localization for ENSG00000264578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000264578 Gene

Pathways & Interactions for ENSG00000264578 Gene

PathCards logo

SuperPathways for ENSG00000264578 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000264578 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000264578 Gene

Drugs & Compounds for ENSG00000264578 Gene

No Compound Related Data Available

Transcripts for ENSG00000264578 Gene

mRNA/cDNA for ENSG00000264578 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000264578 Gene

No ASD Table

Relevant External Links for ENSG00000264578 Gene

GeneLoc Exon Structure for
ENSG00000264578

Expression for ENSG00000264578 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000264578 Gene

genes like me logo Genes that share expression patterns with ENSG00000264578: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000264578 Gene

Orthologs for ENSG00000264578 Gene

Evolution for ENSG00000264578 Gene

ENSEMBL:
Gene Tree for ENSG00000264578 (if available)
TreeFam:
Gene Tree for ENSG00000264578 (if available)

No data available for Orthologs for ENSG00000264578 Gene

Paralogs for ENSG00000264578 Gene

No data available for Paralogs for ENSG00000264578 Gene

Variants for ENSG00000264578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000264578 Gene

Disorders for ENSG00000264578 Gene

No disorders were found for ENSG00000264578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000264578 Gene

Publications for ENSG00000264578 Gene

No publications were found for ENSG00000264578 Gene.

No data available for Mastermind for ENSG00000264578 Gene

Products for ENSG00000264578 Gene

Sources for ENSG00000264578 Gene