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Aliases for ENSG00000264340 Gene
Data sources for ENSG00000264340 Gene:
Subcategory (RNA class) for ENSG00000264340 Gene
lncRNA
Aliases for ENSG00000264340 Gene
External Ids for ENSG00000264340 Gene
- Ensembl: ENSG00000264340
Previous GeneCards Identifiers for ENSG00000264340 Gene
- GC18M072228
Summaries for ENSG00000264340 Gene
GeneCards Summary for ENSG00000264340 Gene
ENSG00000264340 is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for ENSG00000264340 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000264340 Gene
Genomics for ENSG00000264340 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ENSG00000264340 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J074563 | Enhancer | 0.5 | ENCODE | 250.7 | -1.5 | -1479 | 2.7 | CEBPA ZBTB7B RXRA ZNF585B HNF4A ZFP36 SP1 HNF4G YY1 | ENSG00000264340 TSHZ1 HSALNG0122451 ZNF407 CNDP1 | |
| GH18J074564 | Enhancer | 0.3 | Ensembl ENCODE | 250.7 | +0.7 | 741 | 1.2 | ENSG00000264340 CNDP1 piR-51137-054 ZNF407 | ||
| GH18J074540 | Enhancer | 1.4 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | +20.9 | 20931 | 4 | MXD4 CEBPA HOMEZ KDM6A THAP11 FOXA2 ZNF511 SMAD4 SAP130 RXRA | TSHZ1 ZNF407 CNDP1 FAUP1 DIPK1C piR-51137-054 ENSG00000264340 | |
| GH18J074552 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 0.4 | +11.4 | 11434 | 0.6 | CTCF REST TRIM22 SAP130 SMC3 RAD21 ZNF143 ELF3 RXRB ARID4B | CNDP1 ENSG00000264340 piR-51137-054 ZNF407 | |
| GH18J074567 | Enhancer | 0.3 | Ensembl | 0.7 | -5.0 | -4959 | 1.4 | RAD21 CTCF | CNDP1 ZNF407-AS1 CYB5A ENSG00000264340 HSALNG0122451 ZNF407 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ENSG00000264340 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ENSG00000264340 Gene
Latest Assembly
- chr18:74,555,587-74,563,342
- (GRCh38/hg38)
- Size:
- 7,756 bases
- Orientation:
- Minus strand
Previous Assembly
- chr18:72,228,616-72,229,335
- (GRCh37/hg19 by Ensembl)
- Size:
- 720 bases
- Orientation:
- Minus strand
Genomic View for ENSG00000264340 Gene
Genes around ENSG00000264340 on UCSC Golden Path with GeneCards custom track
ENSG00000264340 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 18q22.3 by Ensembl
ENSG00000264340 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000264340 Gene
Proteins for ENSG00000264340 Gene
Post-translational modifications for ENSG00000264340 Gene
No Post-translational modifications
No data available for DME Specific Peptides for ENSG00000264340 Gene
Domains & Families for ENSG00000264340 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000264340 Gene
Function for ENSG00000264340 Gene
Phenotypes From GWAS Catalog for ENSG00000264340 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000264340 Gene
Localization for ENSG00000264340 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000264340 Gene
Transcripts for ENSG00000264340 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000264340 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00002008EE_9606 | lncRNA | 331 | 4 |
Ensembl: ENST00000583702 (view in UCSC) , LncBook: HSALNT0253114, LNCipedia: lnc-FAM69C-1:1, NONCODE: NONHSAT059875.2, |
| URS0001BF1B7C_9606 | lncRNA | 7186 | 1 |
LncBook: HSALNT0253113, |
| URS0001BF6B4B_9606 | lncRNA | 331 | 1 |
LncBook: HSALNT0253114, |
ENSG00000264340 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for ENSG00000264340 Gene
- GeneLoc Exon Structure for
- ENSG00000264340
No data available for mRNA/cDNA for ENSG00000264340 Gene
Expression for ENSG00000264340 Gene
mRNA differential expression in normal tissues according to GTEx for ENSG00000264340 Gene
This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x12.8), Brain - Substantia nigra (x9.1), Brain - Putamen (basal ganglia) (x5.1), Brain - Hippocampus (x4.9), and Brain - Hypothalamus (x4.3).
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000264340 Gene
Orthologs for ENSG00000264340 Gene
No data available for Orthologs for ENSG00000264340 Gene
Paralogs for ENSG00000264340 Gene
No data available for Paralogs for ENSG00000264340 Gene
Variants for ENSG00000264340 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000264340 Gene
Disorders for ENSG00000264340 Gene
No disorders were found for ENSG00000264340 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000264340 Gene
Publications for ENSG00000264340 Gene
No publications were found for ENSG00000264340 Gene.
No data available for Mastermind for ENSG00000264340 Gene
Products for ENSG00000264340 Gene
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- Browse OriGene Inhibitory RNA Products For ENSG00000264340
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000264340
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000264340
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- High-throughput Antibody Production Service
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- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ENSG00000264340
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ENSG00000264340
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ENSG00000264340
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ENSG00000264340
Sources for ENSG00000264340 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB